RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RIMS4Q9H426 269 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-208ENST00000410011 SEBOXQ9HB31 216 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-208ENST00000410011 TCFL5Q9UL49 500 aa14.34□□□□□ -0.11
LIMS2-208ENST00000410011 IGSF23A1L1A6 192 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 IGHV2-5P01817 119 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 PDCD1Q15116 288 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 AKIRIN2Q53H80 203 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 WIPI1Q5MNZ9 446 aaPredicted RBP14.33□□□□□ -0.11
LIMS2-208ENST00000410011 PEAR1Q5VY43 1037 aaPredicted RBP14.33□□□□□ -0.11
LIMS2-208ENST00000410011 ZNF565Q8N9K5 539 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 OR2G3Q8NGZ4 309 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 FAM213BQ8TBF2 198 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 FBXO7Q9Y3I1 522 aa14.33□□□□□ -0.11
LIMS2-208ENST00000410011 SDK2Q58EX2 2172 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 B4E171 279 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 TSPAN7P41732 249 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 POLR2GP62487 172 aaKnown RBP eCLIP14.33□□□□□ -0.12
LIMS2-208ENST00000410011 Q0VFX4 171 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 CEACAM21Q3KPI0 293 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 SOHLH1Q5JUK2 328 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 HLA-CQ95604 372 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 KIAA1456Q9P272 454 aa14.33□□□□□ -0.12
LIMS2-208ENST00000410011 TRBV6-6A0A0A6YYG2 114 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 WNT2P09544 360 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 PPP1CCP36873 323 aaKnown RBP14.32□□□□□ -0.12
LIMS2-208ENST00000410011 OR8G1Q15617 311 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 HIKESHIQ53FT3 197 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 ACER2Q5QJU3 275 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 SPSB3Q6PJ21 355 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 DPPA3Q6W0C5 159 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF818PQ6ZRF7 136 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 LINC00596Q86U02 117 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 NAXEQ8NCW5 288 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 YPEL4Q96NS1 127 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 SIGLEC12Q96PQ1 595 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 ATP23Q9Y6H3 246 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 RBFOX3A6NFN3 312 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 SLC22A20A6NK97 555 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF724A8MTY0 619 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 BCL3P20749 454 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 RNPS1Q15287 305 aaKnown RBP14.32□□□□□ -0.12
LIMS2-208ENST00000410011 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.32□□□□□ -0.12
LIMS2-208ENST00000410011 OR5D13Q8NGL4 314 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 LILRB1Q8NHL6 650 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-208ENST00000410011 ABHD3Q8WU67 409 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 TMEM171Q8WVE6 324 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 PLK3Q9H4B4 646 aa14.32□□□□□ -0.12
LIMS2-208ENST00000410011 A0A1W2PPH5 198 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 A6NLC8 198 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SS18L1O75177 396 aaPredicted RBP14.31□□□□□ -0.12
LIMS2-208ENST00000410011 TRAPPC6AO75865 159 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SLC34A2O95436 690 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 S100A9P06702 114 aaKnown RBP14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SLC25A6P12236 298 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 VAMP2P63027 116 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 PRDX4Q13162 271 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 MKXQ8IYA7 352 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 GAPTQ8N292 157 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SUMF2Q8NBJ7 301 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 OR56B2PQ8NGI1 322 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 ISOC2Q96AB3 205 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 DEPPQ9NTK1 212 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 NOSIPQ9Y314 301 aaKnown RBP14.31□□□□□ -0.12
LIMS2-208ENST00000410011 H0Y980 276 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 ADAM20O43506 726 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 MRPL33O75394 65 aaKnown RBP14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SERPINA7P05543 415 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SCTP09683 121 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF14P17017 642 aaPredicted RBP14.31□□□□□ -0.12
LIMS2-208ENST00000410011 CYB561P49447 251 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SSPNQ14714 243 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 HERPUD1Q15011 391 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 KRBOX4Q5JUW0 171 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 SPIN3Q5JUX0 258 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 ODF3L1Q8IXM7 274 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 CMTM1Q8IZ96 169 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 CD300LFQ8TDQ1 290 aa14.31□□□□□ -0.12
LIMS2-208ENST00000410011 A0A087WWC5 75 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 NOVA1P51513 510 aaKnown RBP14.3□□□□□ -0.12
LIMS2-208ENST00000410011 CXorf66Q5JRM2 361 aaPredicted RBP14.3□□□□□ -0.12
LIMS2-208ENST00000410011 ZDHHC23Q8IYP9 409 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 IL22RA1Q8N6P7 574 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 OR5A2Q8NGI9 324 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 PLPPR1Q8TBJ4 325 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 APOBEC3DQ96AK3 386 aaPredicted RBP14.3□□□□□ -0.12
LIMS2-208ENST00000410011 FGF23Q9GZV9 251 aaPredicted RBP14.3□□□□□ -0.12
LIMS2-208ENST00000410011 OPA3Q9H6K4 179 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 CFIP05156 583 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 GDF1P27539 372 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 HAAOP46952 286 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 IL24Q13007 206 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 FAM24BQ8N5W8 94 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 OR5C1Q8NGR4 320 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 SLAMF9Q96A28 289 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF845Q96IR2 970 aaPredicted RBP14.3□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF251Q9BRH9 671 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 C20orf24Q9BUV8 137 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 MTCH1Q9NZJ7 389 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 RNF115Q9Y4L5 304 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms