RNA–Protein interactions for RNA: ENST00000409945.1

USP40-202, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-202ENST00000409945 MPV17P39210 176 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 DDOSTP39656 456 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SERPINB10P48595 397 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 DVL1P1P54792 670 aaPredicted RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 MTCP1P56278 107 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 PSG7Q13046 419 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 PTGES3Q15185 160 aaKnown RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 ZNF829Q3KNS6 432 aaPredicted RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 STX19Q8N4C7 294 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SPICQ8N5J4 248 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 UXS1Q8NBZ7 420 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR8G5Q8NG78 346 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR52H1Q8NGJ2 320 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR51L1Q8NGJ5 315 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR8D4Q8NGM9 314 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR11L1Q8NGX0 322 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR4Q3Q8NH05 313 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR51F2Q8NH61 342 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SLC7A6Q92536 515 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 BORCS5Q969J3 196 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SLAMF6Q96DU3 332 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 GAL3ST1Q99999 423 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 NIPAL2Q9H841 368 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 CLN6Q9NWW5 311 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 TVP23BQ9NYZ1 205 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 PPP1R3CQ9UQK1 317 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 NSD1Q96L73 2696 aaPredicted RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 CSPG4Q6UVK1 2322 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 IGHV4-61A0A0C4DH41 118 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SNTNA6NMZ2 147 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 ANKRD30BLA7E2S9 258 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 PHYHO14832 338 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 CRLF1O75462 422 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 IGHV1-46P01743 117 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 S100A9P06702 114 aaKnown RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 CD55P08174 381 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 ACSM4P0C7M7 580 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 IGHV4-31P0DP07 118 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 PIPP12273 146 aaPredicted RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 COL8A2P25067 703 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 S100A5P33763 92 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SRP14P37108 136 aaKnown RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 PITPNBP48739 271 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 GMFBP60983 142 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SNRPGP62308 76 aaKnown RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 KCNJ8Q15842 424 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 KRTAP21-3Q3LHN1 58 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 GID4Q8IVV7 300 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 OR5AS1Q8N127 324 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 THEM6Q8WUY1 208 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 YIPF6Q96EC8 236 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 NMNAT2Q9BZQ4 307 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 RGCCQ9H4X1 137 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 SLC25A19Q9HC21 320 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 DDX28Q9NUL7 540 aaKnown RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 MRPL22Q9NWU5 206 aaKnown RBP5.23□□□□□ -1.57
USP40-202ENST00000409945 ZNF391Q9UJN7 358 aa5.23□□□□□ -1.57
USP40-202ENST00000409945 ZNF469Q96JG9 3925 aaPredicted RBP5.22□□□□□ -1.57
USP40-202ENST00000409945 NF1P21359 2839 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 C5orf52A6NGY3 159 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 ZSCAN5BA6NJL1 495 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 FAM183AA6NL82 134 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 IQCF6A8MYZ5 107 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 LYNX1G3V0Z9 82 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 KCNAB3O43448 404 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 GMDSO60547 372 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 LYNX1P0DP58 116 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 MAP2K4P45985 399 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 CX3CR1P49238 355 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 PRKXP51817 358 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 CDK5Q00535 292 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 OR8G1Q15617 311 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 DGUOKQ16854 277 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 TIMM50Q3ZCQ8 353 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 MEDAGQ5VYS4 303 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 SLX4IPQ5VYV7 408 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 C12orf73Q69YU5 71 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 OR2T2Q6IF00 324 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 ACSM5Q6NUN0 579 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 BTNL8Q6UX41 500 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 DPY19L4Q7Z388 723 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 NHLRC2Q8NBF2 726 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 BHLHE23Q8NDY6 225 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 OR8J1Q8NGP2 316 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 S100ZQ8WXG8 99 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 ASB17Q8WXJ9 295 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 GGHQ92820 318 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 DUX5Q96PT3 197 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 OR2V2Q96R30 315 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 CDCA4Q9BXL8 241 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 MROQ9BYG7 248 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 KRTAP17-1Q9BYP8 105 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 NARFLQ9H6Q4 476 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 WDR76Q9H967 626 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 ABCB9Q9NP78 766 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 NPTNQ9Y639 398 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 ABCA1O95477 2261 aa5.22□□□□□ -1.57
USP40-202ENST00000409945 RTTNQ86VV8 2226 aa5.21□□□□□ -1.57
USP40-202ENST00000409945 LRP5LA4QPB2 252 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms