RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 GTF3AQ92664 365 aaKnown RBP9.77□□□□□ -0.84
SNX13-202ENST00000409604 TRIM63Q969Q1 353 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 KCNK7Q9Y2U2 307 aa9.77□□□□□ -0.84
SNX13-202ENST00000409604 A0A0A6YYJ9 748 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 SMPD2O60906 423 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 ESCO2Q56NI9 601 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 SPANXN5Q5MJ07 72 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 C5orf24Q7Z6I8 188 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 YIPF5Q969M3 257 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 ABHD14BQ96IU4 210 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 TREM1Q9NP99 234 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 HILPDAQ9Y5L2 63 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 TRAV38-1A0A0B4J264 116 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 A0A0U1RQV5 110 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 A8MXE2 369 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 ADAP1O75689 374 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 RGS11O94810 467 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 HOXA1P49639 335 aaPredicted RBP9.77□□□□□ -0.85
SNX13-202ENST00000409604 TAS2R31P59538 309 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 RRAS2P62070 204 aaPredicted RBP9.77□□□□□ -0.85
SNX13-202ENST00000409604 IFITM3Q01628 133 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 STUMQ69YW2 141 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 ALKAL2Q6UX46 152 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 CLEC9AQ6UXN8 241 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 NR2C2APQ86WQ0 139 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 PLEKHF2Q9H8W4 249 aa9.77□□□□□ -0.85
SNX13-202ENST00000409604 IFNA5P01569 189 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 SCTP09683 121 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 OR4E1P0C645 316 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 PRF1P14222 555 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 C6orf183Q5T699 404 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 H2BFWTQ7Z2G1 175 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 POM121L2Q96KW2 1035 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 S1PR3Q99500 378 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 TMEM165Q9HC07 324 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 MYOZ1Q9NP98 299 aaPredicted RBP9.76□□□□□ -0.85
SNX13-202ENST00000409604 GHRLQ9UBU3 117 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 SULT1C2O00338 296 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 SSX5O60225 188 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 CLDN14O95500 239 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 PLAUP00749 431 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 SELLP14151 372 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 RPS27AP62979 156 aaKnown RBP9.76□□□□□ -0.85
SNX13-202ENST00000409604 ZNF79Q15937 498 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 MRPL37Q9BZE1 423 aaKnown RBP9.76□□□□□ -0.85
SNX13-202ENST00000409604 MTFP1Q9UDX5 166 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 GLIPR1P48060 266 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 TEX30Q5JUR7 227 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 GLDNQ6ZMI3 551 aaPredicted RBP9.76□□□□□ -0.85
SNX13-202ENST00000409604 FAM216BQ8N7L0 139 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 OR52L2PQ8NGH6 319 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 DEDD2Q8WXF8 326 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 SLC25A21Q9BQT8 299 aaPredicted RBP9.76□□□□□ -0.85
SNX13-202ENST00000409604 LPAR5Q9H1C0 372 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 RAB9BQ9NP90 201 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 CCL28Q9NRJ3 127 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 WIPI2Q9Y4P8 454 aa9.76□□□□□ -0.85
SNX13-202ENST00000409604 IGHV1-18A0A0C4DH31 117 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 RP2O75695 350 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 OR2H2O95918 312 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 IFNA2P01563 188 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 ACTBL2Q562R1 376 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SCMH1Q96GD3 660 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SH2D2AQ9NP31 389 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 A0A1B0GTI1 187 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 LRP5LA4QPB2 252 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 H7C1Q1 480 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 ZBTB25P24278 435 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 WNT5AP41221 380 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 FHL1Q13642 323 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SCPEP1Q9HB40 452 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SLC25A10Q9UBX3 287 aaPredicted RBP9.75□□□□□ -0.85
SNX13-202ENST00000409604 PFDN2Q9UHV9 154 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 E9PLN8 166 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 TSPAN4O14817 238 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 PET100P0DJ07 73 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 RPS11P62280 158 aaKnown RBP eCLIP9.75□□□□□ -0.85
SNX13-202ENST00000409604 MAPK1IP1LQ8NDC0 245 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 RPEQ96AT9 228 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 LYZL4Q96KX0 146 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 VKORC1Q9BQB6 163 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 V9GYH0 126 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 IGHMP01871 453 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 TMEM11P17152 192 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 AADACP22760 399 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 PMELP40967 661 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 PPP1R1AQ13522 171 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SPAG16Q8N0X2 631 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 HPSE2Q8WWQ2 592 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 TMEM45BQ96B21 275 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 SLC25A38Q96DW6 304 aa9.75□□□□□ -0.85
SNX13-202ENST00000409604 TRBV5-5A0A0J9YX44 114 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 SSSCA1O60232 199 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 SS18L1O75177 396 aaPredicted RBP9.74□□□□□ -0.85
SNX13-202ENST00000409604 CST7O76096 145 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 TPPPO94811 219 aa9.74□□□□□ -0.85
SNX13-202ENST00000409604 DEFA5Q01523 94 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms