RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 POLR3AO14802 1390 aaPredicted RBP1.09□□□□□ -2.24
PMS1-203ENST00000409593 NRCAMQ92823 1304 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 STRCP1A6NGW2 1772 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 ANKRD20A5PA0PJZ0 165 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 GATCO43716 136 aaKnown RBP1.08□□□□□ -2.24
PMS1-203ENST00000409593 ZNF189O75820 626 aaPredicted RBP1.08□□□□□ -2.24
PMS1-203ENST00000409593 MAGEA3P43357 314 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 XKP51811 444 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 TAL2Q16559 108 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 ZCWPW2Q504Y3 356 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 TMCO2Q7Z6W1 182 aaPredicted RBP1.08□□□□□ -2.24
PMS1-203ENST00000409593 GAPTQ8N292 157 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 OR52K1Q8NGK4 314 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 CXCL16Q9H2A7 254 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 IFNKQ9P0W0 207 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 CHTOPQ9Y3Y2 248 aaKnown RBP1.08□□□□□ -2.24
PMS1-203ENST00000409593 OR51B4Q9Y5P0 310 aa1.08□□□□□ -2.24
PMS1-203ENST00000409593 LOC102725191A0A1B0GVB3 256 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 M0QXV9 152 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 STAG3L3P0CL85 134 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 CPMP14384 443 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 EVI2BP34910 448 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 GOLGA7BQ2TAP0 167 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 C10orf107Q8IVU9 208 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 TCAIMQ8N3R3 496 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 OR51Q1Q8NH59 317 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 REEP6Q96HR9 211 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 FAM206AQ9NX38 181 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 LINC00588Q9Y4M8 146 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 ADAMTS7Q9UKP4 1686 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 A0A1B0GTQ1 180 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 SLC25A20O43772 301 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 MYO1DO94832 1006 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 ARR3P36575 388 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 GABRA4P48169 554 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 CLHC1Q8NHS4 586 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 BLNKQ8WV28 456 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 MYCBPQ99417 103 aaPredicted RBP1.07□□□□□ -2.24
PMS1-203ENST00000409593 ZNF251Q9BRH9 671 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 SLC19A3Q9BZV2 496 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 PRORYQ9H606 182 aa1.07□□□□□ -2.24
PMS1-203ENST00000409593 TRAV8-3A0A0A6YYJ7 113 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 A0A1B0GXF2 115 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 TVP23AA6NH52 213 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 F8VP50 259 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 TRAPPC3O43617 180 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 GBE1Q04446 702 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 C2orf80Q0P641 193 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 SS18Q15532 418 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 ARHGAP18Q8N392 663 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 OR52B2Q96RD2 323 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 RGCCQ9H4X1 137 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 PEF1Q9UBV8 284 aaKnown RBP1.06□□□□□ -2.24
PMS1-203ENST00000409593 PSORS1C2Q9UIG4 136 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 LAMB2P55268 1798 aa1.06□□□□□ -2.24
PMS1-203ENST00000409593 MDC1Q14676 2089 aaKnown RBP1.05□□□□□ -2.24
PMS1-203ENST00000409593 A0A0J9YX75 114 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 PGPA6NDG6 321 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 ARGFXA6NJG6 315 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 SIGLEC16A6NMB1 481 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 ZNF7P17097 686 aaPredicted RBP1.05□□□□□ -2.24
PMS1-203ENST00000409593 MMDQ15546 238 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 C16orf87Q6PH81 154 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 DRAXINQ8NBI3 349 aaPredicted RBP1.05□□□□□ -2.24
PMS1-203ENST00000409593 DOK4Q8TEW6 326 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 VAT1Q99536 393 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 NXF2Q9GZY0 626 aaKnown RBP1.05□□□□□ -2.24
PMS1-203ENST00000409593 BTRCQ9Y297 605 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 AMMECR1Q9Y4X0 333 aaPredicted RBP1.05□□□□□ -2.24
PMS1-203ENST00000409593 CACNA1SQ13698 1873 aa1.05□□□□□ -2.24
PMS1-203ENST00000409593 PLPP3O14495 311 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 SPOPO43791 374 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 APOFQ13790 326 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 N4BP2L1Q5TBK1 243 aaPredicted RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 KRTCAP2Q8N6L1 136 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 DCANP1Q8TF63 244 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 KCTD4Q8WVF5 259 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 ZNF707Q96C28 371 aaPredicted RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 APOL4Q9BPW4 351 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 CHID1Q9BWS9 393 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 BCL2L14Q9BZR8 327 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 ACOT13Q9NPJ3 140 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 PTPRKQ15262 1439 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 YLPM1P49750 1951 aaKnown RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 ZNF638Q14966 1978 aaKnown RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 IGSF23A1L1A6 192 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 NCF1BA6NI72 391 aaPredicted RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 NCF1CA8MVU1 366 aaPredicted RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 K7EN84 100 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 ENSAO43768 121 aaKnown RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 ANGP03950 147 aaKnown RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 PEX19P40855 299 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 FAM58AQ8N1B3 248 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 CASTOR1Q8WTX7 329 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 FAM131CQ96AQ9 280 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 KIAA1143Q96AT1 154 aaPredicted RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 CAPZA3Q96KX2 299 aa1.04□□□□□ -2.24
PMS1-203ENST00000409593 UTP23Q9BRU9 249 aaKnown RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 TDRD3Q9H7E2 651 aaKnown RBP1.04□□□□□ -2.24
PMS1-203ENST00000409593 V9GYY9 64 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms