RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CPEB2Q7Z5Q1 589 aaKnown RBP13.39□□□□□ -0.27
LIMS2-205ENST00000409455 CMTM1Q8IZ96 169 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 LYZL4Q96KX0 146 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 NDUFAF3Q9BU61 184 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 GPR87Q9BY21 358 aa13.39□□□□□ -0.27
LIMS2-205ENST00000409455 LYRM2Q9NU23 88 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-205ENST00000409455 SSSCA1O60232 199 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 ONECUT2O95948 504 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 CYB5R3P00387 301 aaPredicted RBP13.38□□□□□ -0.27
LIMS2-205ENST00000409455 ZFP36L1Q07352 338 aaKnown RBP13.38□□□□□ -0.27
LIMS2-205ENST00000409455 C17orf67Q0P5P2 114 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF441Q8N8Z8 693 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 SUMF1Q8NBK3 374 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 OR11L1Q8NGX0 322 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 PIGLQ9Y2B2 252 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 GZMBP10144 247 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 RAB11AP62491 216 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 SRPXP78539 464 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 SP5Q6BEB4 398 aaPredicted RBP13.38□□□□□ -0.27
LIMS2-205ENST00000409455 DPPA3Q6W0C5 159 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM252Q8N6L7 170 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF160Q9HCG1 818 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 DCAF16Q9NXF7 216 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 WASF3Q9UPY6 502 aa13.38□□□□□ -0.27
LIMS2-205ENST00000409455 A0A1B0GU03 582 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 C5orf63A6NC05 138 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 GEMIN2O14893 280 aaKnown RBP13.37□□□□□ -0.27
LIMS2-205ENST00000409455 SNRPCP09234 159 aaKnown RBP13.37□□□□□ -0.27
LIMS2-205ENST00000409455 CCL4P13236 92 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 SUMO3P55854 103 aaPredicted RBP13.37□□□□□ -0.27
LIMS2-205ENST00000409455 SPIN2AQ99865 258 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 SPIN2BQ9BPZ2 258 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 CABLES2Q9BTV7 478 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 C11orf1Q9H5F2 150 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 V9GYS6 101 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
LIMS2-205ENST00000409455 TRBV24-1A0A075B6N3 115 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 LOC102723971A0A1B0GUV8 181 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 NKX2-6A6NCS4 301 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 SHISA8B8ZZ34 492 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 CYTIPO60759 359 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 OPN1MWP04001 364 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 OPN1MW2P0DN77 364 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 OPN1MW3P0DN78 364 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 FGF5P12034 268 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 HERV-K104P61576 105 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
LIMS2-205ENST00000409455 RUNX1Q01196 453 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 MYBPHQ13203 477 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 SLC25A47Q6Q0C1 308 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 AGBL5Q8NDL9 886 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 BEND2Q8NDZ0 799 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 MOB3AQ96BX8 217 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM68Q96MH6 324 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 TP53RKQ96S44 253 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 METTL9Q9H1A3 318 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 GNG13Q9P2W3 67 aa13.37□□□□□ -0.27
LIMS2-205ENST00000409455 A0A0U1RQV5 110 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 F5H5K5 113 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 IGLV3-1P01715 115 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 DYNLT3P51808 116 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 FBXW4P57775 412 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 IL11RAQ14626 422 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 PLA2G2CQ5R387 149 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 MYO7BQ6PIF6 2116 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM217Q8N7C4 229 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 LOXL4Q96JB6 756 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 MRPL37Q9BZE1 423 aaKnown RBP13.36□□□□□ -0.27
LIMS2-205ENST00000409455 ACTR3CQ9C0K3 210 aaPredicted RBP13.36□□□□□ -0.27
LIMS2-205ENST00000409455 HIPK2Q9H2X6 1198 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 GLRX2Q9NS18 164 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 C3orf85A0A1B0GTC6 90 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 CST7O76096 145 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF883P0CG24 379 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 UCP3P55916 312 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 MTCP1P56278 107 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 BAXQ07812 192 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 ANKRD37Q7Z713 158 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF100Q8IYN0 542 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 OR5L2Q8NGL0 311 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 POM121Q96HA1 1249 aa13.36□□□□□ -0.27
LIMS2-205ENST00000409455 TRDCB7Z8K6 153 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 PROB1E7EW31 1015 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 AMBPP02760 352 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 ACP1P24666 158 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 TRA2AQ13595 282 aaKnown RBP eCLIP13.35□□□□□ -0.27
LIMS2-205ENST00000409455 KCNMB1Q16558 191 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM123Q8N131 208 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 OR10A7Q8NGE5 316 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 DDA1Q9BW61 102 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 MAGT1Q9H0U3 335 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 CDH20Q9HBT6 801 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF286AQ9HBT8 521 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 TRAF3IP2O43734 574 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-205ENST00000409455 DFFBO76075 338 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 CEACAM1P13688 526 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 CTSSP25774 331 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms