RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 FAM90A18PA6NE21 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A16PA6NEW6 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A20PA6NIJ5 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A8PA6NJQ4 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A7PA6NKC0 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A22PA8MWA6 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A12PA8MX19 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A5PA8MXJ8 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A23PA8MXZ1 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 SLC17A2O00624 439 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 BPNT1O95861 308 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A15PP0C7V4 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A13PP0C7W8 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A14PP0C7W9 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM90A24PP0C7X0 464 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 VSIG8P0DPA2 414 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 C22orf42Q6IC83 251 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 KCNG3Q8TAE7 436 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 CORO2AQ92828 525 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 FAM46BQ96A09 425 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 SLC25A28Q96A46 364 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 Q96M66 194 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 ZNF48Q96MX3 618 aaPredicted RBP16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 NCOR1P1Q9H4R4 102 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 PLGRKTQ9HBL7 147 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 VCX3AQ9NNX9 186 aa16.23■□□□□ 0.19
PDLIM2-207ENST00000409417 PDCD5O14737 125 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 VENTXO95231 258 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 MYL9P24844 172 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 ERVFRD-1P60508 538 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 KLRD1Q13241 179 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 HCP5Q6MZN7 132 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 TRAPPC6BQ86SZ2 158 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 PRDM13Q9H4Q3 707 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 ING3Q9NXR8 418 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 V9GY05 133 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 KIAA2026Q5HYC2 2103 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 SHISA3A0PJX4 238 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 H3BUI4 141 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 RANBP1P43487 201 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 QRFPP83859 136 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 SRSF2Q01130 221 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 RAB11BQ15907 218 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 DEFB112Q30KQ8 113 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 ATAD3CQ5T2N8 411 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 TXNL4BQ9NX01 149 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 TAS2R3Q9NYW6 316 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 OR6C3Q9NZP0 311 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 RCC2Q9P258 522 aaKnown RBP16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 SSR3Q9UNL2 185 aa16.22■□□□□ 0.19
PDLIM2-207ENST00000409417 NPFFO15130 113 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 MPIG6BO95866 241 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 IGHV1-8P0DP01 117 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 ARSBP15848 533 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 RSBN1Q5VWQ0 802 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 OR10K2Q6IF99 312 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 ZNF782Q6ZMW2 699 aaPredicted RBP16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 PLPPR1Q8TBJ4 325 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 TMEM59Q9BXS4 323 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 GAL3ST2Q9H3Q3 398 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 KIF25Q9UIL4 384 aa16.21■□□□□ 0.19
PDLIM2-207ENST00000409417 MEIKINA0A087WXM9 373 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 TRIM64CA6NLI5 447 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 TMEM14DPA8MWL7 114 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 CD36P16671 472 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 FUT3P21217 361 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 RPS27AP62979 156 aaKnown RBP16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 UNC119Q13432 240 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 P2RY14Q15391 338 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 MIDNQ504T8 468 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 ZNF565Q8N9K5 539 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 ZFAND2BQ8WV99 257 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 TMEM158Q8WZ71 300 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 OR51E2Q9H255 320 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 ESM1Q9NQ30 184 aa16.2■□□□□ 0.18
PDLIM2-207ENST00000409417 A0A0U1RQK1 487 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 MDFIC2A0A1B0GVS7 189 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 A0A1W2PRD5 423 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 A0A1W2PRF3 423 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 A0A1W2PRM7 423 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 MCRIP1C9JLW8 97 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 CLPXO76031 633 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 GLAP06280 429 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 CFPP27918 469 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 SAA4P35542 130 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 OR10A3P58181 314 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 BAMBIQ13145 260 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 RBM39Q14498 530 aaKnown RBP16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 SIGIRRQ6IA17 410 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 SLC35E4Q6ICL7 350 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 RAB12Q6IQ22 244 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 BRICD5Q6PL45 260 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 HEPN1Q6WQI6 88 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 OR2W3Q7Z3T1 314 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 PNKDQ8N490 385 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 ZDHHC22Q8N966 263 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 NEK7Q8TDX7 302 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 ZDHHC16Q969W1 377 aa16.19■□□□□ 0.18
PDLIM2-207ENST00000409417 FAM3DQ96BQ1 224 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms