RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 ADRA2AP08913 450 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 CDC34P49427 236 aaPredicted RBP21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 RAG2P55895 527 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 CLEC12BQ2HXU8 276 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 ZBTB44Q8NCP5 570 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 FOCADQ5VW36 1801 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 OR4C45A6NMZ5 311 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 MYPOPQ86VE0 399 aaPredicted RBP21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 SLC24A4Q8NFF2 622 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 WIPI2Q9Y4P8 454 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 TEX29Q8N6K0 151 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 ZNF680Q8NEM1 530 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 RNF122Q9H9V4 155 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 PRNDQ9UKY0 176 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 YTHDF2Q9Y5A9 579 aaKnown RBP21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 ZNF716A6NP11 495 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 CCL8P80075 99 aa21.92■■□□□ 1.1
SPIRE1-202ENST00000409402 CROCCQ5TZA2 2017 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 MAP1LC3B2A6NCE7 125 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 UCP2P55851 309 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 TAGLNQ01995 201 aaKnown RBP21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 CSRP2Q16527 193 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 ADAMTS17Q8TE56 1095 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 MAP1LC3BQ9GZQ8 125 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 HS3ST3B1Q9Y662 390 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 MMP16P51512 607 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 TMEM74BQ9NUR3 256 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 TRIM77I1YAP6 450 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 TO15178 435 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 RPL31P62899 125 aaKnown RBP21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 GGTLC2Q14390 218 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 HARBI1Q96MB7 349 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 PRSS23O95084 383 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 MVDP53602 400 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 ST3GAL2Q16842 350 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 MIDNQ504T8 468 aa21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 PCDHGA9Q9Y5G4 932 aaKnown RBP21.91■■□□□ 1.1
SPIRE1-202ENST00000409402 ERVFRD-1P60508 538 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 PDZD11Q5EBL8 140 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 NFAM1Q8NET5 270 aaPredicted RBP21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 PIGYQ3MUY2 71 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 FAHD2BQ6P2I3 314 aaPredicted RBP21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 FA2HQ7L5A8 372 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 OR10A7Q8NGE5 316 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 FAHD2AQ96GK7 314 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 GNG4P50150 75 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 GAPTQ8N292 157 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 COL10A1Q03692 680 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 DHRS7BQ6IAN0 325 aaPredicted RBP21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 OR10G4Q8NGN3 311 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 OR10G9Q8NGN4 311 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 OR10G7Q8NGN6 311 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 ANKRD31Q8N7Z5 1873 aa21.9■■□□□ 1.1
SPIRE1-202ENST00000409402 ATP6V1G2-DDX39BF2Z307 99 aa21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 RPS4XP62701 263 aaKnown RBP21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 ZNF429Q86V71 674 aa21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 ZBTB34Q8NCN2 500 aa21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 OR4A4PQ8NGN8 299 aa21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 ZCCHC14Q8WYQ9 949 aaKnown RBP21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 RPL36A-HNRNPH2H7BZ11 118 aa21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 DUSP18Q8NEJ0 188 aa21.89■■□□□ 1.1
SPIRE1-202ENST00000409402 ATG2BQ96BY7 2078 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 DXOO77932 396 aaKnown RBP21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 PRDX2P32119 198 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 AESQ08117 197 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 DYNLRB2Q8TF09 96 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 ARL2-SNX15V9GYD0 113 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 ATAD5Q96QE3 1844 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 A0A1W2PQM1 296 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 ACP1P24666 158 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 IL24Q13007 206 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 PRSS54Q6PEW0 395 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 CENPVL1A0A0U1RR11 272 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 SYNGR2O43760 224 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 PPYP01298 95 aa21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 CISD1Q9NZ45 108 aaKnown RBP21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 SF3B6Q9Y3B4 125 aaKnown RBP21.89■■□□□ 1.09
SPIRE1-202ENST00000409402 PRR19A6NJB7 356 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 PSG4Q00888 419 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 ZNF519Q8TB69 540 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 Q8WTZ3 238 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 ARG1P05089 322 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 C19orf48Q6RUI8 117 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 ALX3O95076 343 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 WISP3O95389 354 aaPredicted RBP21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 MPC2O95563 127 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 MMDQ15546 238 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 ZNF596Q8TC21 504 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 ATP5SQ99766 215 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 CCL28Q9NRJ3 127 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 OR2W1Q9Y3N9 320 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 CACNA1CQ13936 2221 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 SPAG17Q6Q759 2223 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 CTDSPLO15194 276 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 INHBBP09529 407 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 COX6A1P12074 109 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 KCNMB1Q16558 191 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 GUK1Q16774 197 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 PDPNQ86YL7 162 aa21.88■■□□□ 1.09
SPIRE1-202ENST00000409402 SLC7A10Q9NS82 523 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms