RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 TWIST2Q8WVJ9 160 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 C22orf15Q8WYQ4 148 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 FAM131CQ96AQ9 280 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 REEP6Q96HR9 211 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 CPB2Q96IY4 423 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 METTL26Q96S19 204 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 ANAPC13Q9BS18 74 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 CRACR2AQ9BSW2 395 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 ZNF426Q9BUY5 554 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 SHCBP1LQ9BZQ2 653 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 SMDT1Q9H4I9 107 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 SDHAF3Q9NRP4 125 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 MYEF2Q9P2K5 600 aaKnown RBP-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 PEF1Q9UBV8 284 aaKnown RBP-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 PSMD13Q9UNM6 376 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 TFR2Q9UP52 801 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 FLVCR2Q9UPI3 526 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 TNIKQ9UKE5 1360 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 NOS1P29475 1434 aa-0.24□□□□□ -2.45
MIR548I3-201ENST00000408378 EML5Q05BV3 1969 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 DSTQ03001 7570 aaKnown RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 OR2AT4A6NND4 320 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 HACD1B0YJ81 288 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 UPK2O00526 184 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 TRDMT1O14717 391 aaKnown RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 TCAPO15273 167 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 SOD1P00441 154 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 NPPAP01160 153 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 PRTN3P24158 256 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 TAGLN2P37802 199 aaKnown RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 CD200P41217 278 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 ATP5IP56385 69 aaPredicted RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 PAFAH1B2P68402 229 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 ERHP84090 104 aaKnown RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 APOFQ13790 326 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 GPR176Q14439 515 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 CDK5R1Q15078 307 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 SURF2Q15527 256 aaPredicted RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 ALKBH6Q3KRA9 238 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 IDNKQ5T6J7 187 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 TWF2Q6IBS0 349 aaKnown RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 CCDC121Q6ZUS5 278 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 GABRG1Q8N1C3 465 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 ASCC1Q8N9N2 400 aaKnown RBP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 C15orf53Q8NAA6 179 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 OR8B12Q8NGG6 310 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 CCL17Q92583 94 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 GSDMAQ96QA5 445 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 ULBP1Q9BZM6 244 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 DEFB129Q9H1M3 183 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 C10orf95Q9H7T3 257 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 CD209Q9NNX6 404 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 C8orf4Q9NR00 106 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 DDIT4Q9NX09 232 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 STK38LQ9Y2H1 464 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 BDP1A6H8Y1 2624 aa-0.25□□□□□ -2.45
MIR548I3-201ENST00000408378 DSCAML1Q8TD84 2053 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 HEATR5BQ9P2D3 2071 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 SCN9AQ15858 1988 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 NINLQ9Y2I6 1382 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 WDR19Q8NEZ3 1342 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 ZNF532Q9HCE3 1301 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 IGHV3-73A0A0B4J1V6 119 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 RNASEK-C17orf49H0YIS7 233 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 H3BPC8 53 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 TOR1AO14656 332 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 PRMT5O14744 637 aaPredicted RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 GNRH2O43555 120 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 DENRO43583 198 aaKnown RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 SPOPO43791 374 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 ZNF737O75373 536 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 PTTG1O95997 202 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 RLN2P04090 185 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 OR4A8P0C604 315 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 TAC1P20366 129 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 IDH3GP51553 393 aaPredicted RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 HCCSP53701 268 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 CLDN6P56747 220 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 ATP6V0D1P61421 351 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 ZNF90Q03938 601 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 SLC38A11Q08AI6 406 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 CEACAM21Q3KPI0 293 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 ANKDD1AQ495B1 522 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 FP248Q71RG6 208 aaPredicted RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 FAM122BQ7Z309 247 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 SETD3Q86TU7 594 aaPredicted RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 LRRC28Q86X40 367 aaPredicted RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 TBC1D21Q8IYX1 336 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 SLC35F6Q8N357 371 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 KIF2BQ8N4N8 673 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 TRIML2Q8N7C3 387 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 C8orf31Q8N9H6 132 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 AKR7LQ8NHP1 331 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 RASD2Q96D21 266 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 C9orf72Q96LT7 481 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 JSRP1Q96MG2 331 aaPredicted RBP-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 RILPQ96NA2 401 aa-0.26□□□□□ -2.45
MIR548I3-201ENST00000408378 OR2M4Q96R27 311 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms