RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DTX3Q8N9I9 347 aa15.47■□□□□ 0.07
SMARCB1-204ENST00000407422 ZNF596Q8TC21 504 aa15.47■□□□□ 0.07
SMARCB1-204ENST00000407422 CPNE2Q96FN4 548 aaPredicted RBP15.47■□□□□ 0.07
SMARCB1-204ENST00000407422 PRSS22Q9GZN4 317 aa15.47■□□□□ 0.07
SMARCB1-204ENST00000407422 KIF25Q9UIL4 384 aa15.47■□□□□ 0.07
SMARCB1-204ENST00000407422 OGG1O15527 345 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 CGB3P0DN86 165 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 CGB7P0DN87 165 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 CD34P28906 385 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 RSU1Q15404 277 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 TMEM95Q3KNT9 176 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 TTC23Q5W5X9 447 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 ASCL4Q6XD76 172 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 Q8NFD4 153 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 OR4D6Q8NGJ1 314 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 SMIM19Q96E16 107 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 OR6C3Q9NZP0 311 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 ZNF281Q9Y2X9 895 aa15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.07
SMARCB1-204ENST00000407422 KBTBD11-OT1A0A1B0GTJ5 212 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 IRGMA1A4Y4 181 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 ZNF729A6NN14 1252 aaPredicted RBP15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 CD28P10747 220 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 MYL12AP19105 171 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 RCN1Q15293 331 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 ZFP41Q8N8Y5 198 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 OR13A1Q8NGR1 328 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 GHSRQ92847 366 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 TMEM80Q96HE8 168 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 TMEM138Q9NPI0 162 aa15.46■□□□□ 0.06
SMARCB1-204ENST00000407422 MEIKINA0A087WXM9 373 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 A0A087X0M5 115 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 A0A1B0GX30 115 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 LEUTXA8MZ59 168 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 BUB1B-PAK6H3BSN5 160 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 HTR3BO95264 441 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 ALDOBP05062 364 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 NFYBP25208 207 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 GLP1RP43220 463 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 IL13RA2Q14627 380 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 HLA-DRB5Q30154 266 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 DDI2Q5TDH0 399 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 DHRSXQ8N5I4 330 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 PACRGLQ8N7B6 248 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 PLPPR1Q8TBJ4 325 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 WIPF2Q8TF74 440 aaPredicted RBP15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 GGHQ92820 318 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 KIRREL1Q96J84 757 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 ING4Q9UNL4 249 aa15.45■□□□□ 0.06
SMARCB1-204ENST00000407422 TOR1AO14656 332 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 FBXO24O75426 580 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 IGHV3-7P01780 117 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 GNAO1P09471 354 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 ZNF93P35789 620 aaPredicted RBP15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 PPP3R1P63098 170 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 RBM39Q14498 530 aaKnown RBP15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 RSBN1Q5VWQ0 802 aaPredicted RBP15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 DMKNQ6E0U4 476 aaPredicted RBP15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 ZNF485Q8NCK3 441 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 SETD9Q8NE22 299 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 BARHL1Q9BZE3 327 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 WNT10AQ9GZT5 417 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 CALYQ9NYX4 217 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 ST3GAL6Q9Y274 331 aa15.44■□□□□ 0.06
SMARCB1-204ENST00000407422 TRAV39A0A0B4J263 110 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 TRBV5-5A0A0J9YX44 114 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 MAGEA13PA6NCF6 341 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 LY6LH3BQJ8 138 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 BDKRB2P30411 391 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 RPS11P62280 158 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 ST3GAL4Q11206 333 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 NSUN5P1Q3KNT7 163 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 ARSJQ5FYB0 599 aaPredicted RBP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 TPTE2P1Q5T6R2 138 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 LAIR2Q6ISS4 152 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 ZNF565Q8N9K5 539 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 OR52N1Q8NH53 320 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 LEAP2Q969E1 77 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 C8orf4Q9NR00 106 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 OPN1MWP04001 364 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 OPN1MW2P0DN77 364 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 OPN1MW3P0DN78 364 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 IGFBP3P17936 291 aaPredicted RBP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 BRS3P32247 399 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 PRRX1P54821 245 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 SUMF2Q8NBJ7 301 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 RFESDQ8TAC1 157 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 MRGPRDQ8TDS7 321 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 PGLYRP3Q96LB9 341 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 CITED2Q99967 270 aaPredicted RBP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 OCSTAMPQ9BR26 566 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 DPCDQ9BVM2 203 aaPredicted RBP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 METTL9Q9H1A3 318 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 NCOR1P1Q9H4R4 102 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 CHCHD3Q9NX63 227 aaKnown RBP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 IL36GQ9NZH8 169 aa15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.43■□□□□ 0.06
SMARCB1-204ENST00000407422 TRAV8-7A0A075B6U6 113 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 XPNPEP2O43895 674 aa15.42■□□□□ 0.06
SMARCB1-204ENST00000407422 PEX14O75381 377 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms