RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR2D2Q9H210 308 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 MKI67P46013 3256 aaKnown RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 ATRXP46100 2492 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 OR5H14A6NHG9 310 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 SMPD2O60906 423 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 TSPAN15O95858 294 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 AKR1C1Q04828 323 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PLA1AQ53H76 456 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 NCCRP1Q6ZVX7 275 aaPredicted RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 DRAXINQ8NBI3 349 aaPredicted RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 CD300LFQ8TDQ1 290 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CCL13Q99616 98 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 PROK2Q9HC23 129 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 CLN8Q9UBY8 286 aa7.83□□□□□ -1.16
LIG4-202ENST00000405925 FOXD3Q9UJU5 478 aaPredicted RBP7.83□□□□□ -1.16
LIG4-202ENST00000405925 POM121CA8CG34 1229 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 PRSS44E7EML9 344 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 M0R036 132 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 LGALS8O00214 317 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 PLA2G10O15496 165 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 GSTZ1O43708 216 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 SLC6A1P30531 599 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 KIR2DL2P43627 348 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 NPBWR2P48146 333 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 SPANXN5Q5MJ07 72 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 OR10S1Q8NGN2 331 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 LPAR2Q9HBW0 351 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 KCNK7Q9Y2U2 307 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 NPTNQ9Y639 398 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 CREBBPQ92793 2442 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 IGHV2OR16-5A0A0B4J2B6 119 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 A0A1B0GTI1 187 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 A0A1W2PNU3 283 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 LOC390937A0A1W2PQ73 354 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 TRDCB7Z8K6 153 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 COX6B1P14854 86 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 PSMB6P28072 239 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 GNB1P62873 340 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 TRAT1Q6PIZ9 186 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 GLDNQ6ZMI3 551 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 SPAG16Q8N0X2 631 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 POM121L2Q96KW2 1035 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 AIFM2Q9BRQ8 373 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 SUCNR1Q9BXA5 334 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 COMMD5Q9GZQ3 224 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 NXF2Q9GZY0 626 aaKnown RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 PLEKHA3Q9HB20 300 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 C1QTNF9BB2RNN3 333 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 E9PLN8 166 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 H3BP45 60 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 J3QW42 95 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 FCGR3BO75015 233 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 CA11O75493 328 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 IL5P05113 134 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 C1QTNF9P0C862 333 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 PMELP40967 661 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 CEBPDP49716 269 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 RPS11P62280 158 aaKnown RBP eCLIP7.82□□□□□ -1.16
LIG4-202ENST00000405925 RPL31P62899 125 aaKnown RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 ATPAF1Q5TC12 328 aaPredicted RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 MUC15Q8N387 334 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 OR8B3Q8NGG8 313 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 RPS4Y2Q8TD47 263 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 PPP1R1CQ8WVI7 109 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 PCNPQ8WW12 178 aaKnown RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 RPEQ96AT9 228 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 MSI2Q96DH6 328 aaKnown RBP7.82□□□□□ -1.16
LIG4-202ENST00000405925 OR8B2Q96RD0 313 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 VKORC1Q9BQB6 163 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 SHARPINQ9H0F6 387 aa7.82□□□□□ -1.16
LIG4-202ENST00000405925 ANKHD1Q8IWZ3 2542 aaKnown RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 NKX2-6A6NCS4 301 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 BTBD17A6NE02 478 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 SSSCA1O60232 199 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 GYPAP02724 150 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 DEFA4P12838 97 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 GZMHP20718 246 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 AADACP22760 399 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 DTYMKP23919 212 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 S100A11P31949 105 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 COL10A1Q03692 680 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 BSPH1Q075Z2 132 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 PSG7Q13046 419 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 IL13RA2Q14627 380 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 MUC20Q8N307 709 aaPredicted RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 SULT4A1Q9BR01 284 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 KIAA1456Q9P272 454 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 ZNF319Q9P2F9 582 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 ZNF705EA8MWA4 302 aaPredicted RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 RPL36A-HNRNPH2H7BZ11 118 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 IAPPP10997 89 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 RAB11AP62491 216 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 IFITM3Q01628 133 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 PRR30Q53SZ7 412 aaPredicted RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 AVPI1Q5T686 147 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 RBMXL3Q8N7X1 1067 aaKnown RBP7.81□□□□□ -1.16
LIG4-202ENST00000405925 DIRC2Q96SL1 478 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 MARVELD1Q9BSK0 173 aa7.81□□□□□ -1.16
LIG4-202ENST00000405925 C1QTNF5Q9BXJ0 243 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms