RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 COMMD9Q9P000 198 aa24.54■■□□□ 1.52
CSNK1E-205ENST00000405675 SHANK1Q9Y566 2161 aa24.54■■□□□ 1.52
CSNK1E-205ENST00000405675 ERVH48-1M5A8F1 160 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 IFNA2P01563 188 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 S100A11P31949 105 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 PIGPP57054 158 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 HOXA4Q00056 320 aaPredicted RBP24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 HERPUD1Q15011 391 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 C22orf34Q6ZV56 151 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 Q8IYB0 196 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 MFFQ9GZY8 342 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 SIRPB1O00241 398 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 NXPH2O95156 264 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 RPA2P15927 270 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 EXOSC2Q13868 293 aaKnown RBP24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 C11orf87Q6NUJ2 197 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 ZNF546Q86UE3 836 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 CXXC4Q9H2H0 198 aa24.53■■□□□ 1.52
CSNK1E-205ENST00000405675 TRGV8A0A0C4DH27 118 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 SNAPC5O75971 98 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 SLC25A4P12235 298 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 PRAMEF6Q5VXH4 476 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 SGPP2Q8IWX5 399 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 GTF3AQ92664 365 aaKnown RBP24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 ARL6Q9H0F7 186 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 IGKV1-6A0A0C4DH72 117 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 TEX13DA0A0J9YY54 714 aaPredicted RBP24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 TRDCB7Z8K6 153 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 OR2H2O95918 312 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 LRP11Q86VZ4 500 aa24.52■■□□□ 1.52
CSNK1E-205ENST00000405675 PPYP01298 95 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 GLAP06280 429 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 C4BPBP20851 252 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 AP2S1P53680 142 aaPredicted RBP24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 PHLDA2Q53GA4 152 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 TMEM65Q6PI78 240 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 ST6GALNAC3Q8NDV1 305 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 OR5T2Q8NGG2 359 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 MUCL1Q96DR8 90 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 OR10C1Q96KK4 312 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 FAM210AQ96ND0 272 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 PIGMQ9H3S5 423 aa24.51■■□□□ 1.51
CSNK1E-205ENST00000405675 SLC33A1O00400 549 aaPredicted RBP24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 BET1O15155 118 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 RBMXP38159 391 aaKnown RBP24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 RBM39Q14498 530 aaKnown RBP24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 ATXN7L3Q14CW9 347 aaPredicted RBP24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 RGS7BPQ6MZT1 257 aaPredicted RBP24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 POC1AQ8NBT0 407 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 OR11L1Q8NGX0 322 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 RIMS4Q9H426 269 aaPredicted RBP24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 ATP23Q9Y6H3 246 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 TRBV6-6A0A0A6YYG2 114 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 WNT9BO14905 357 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 HOXB5P09067 269 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 UCP3P55916 312 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 HERV-K104P61576 105 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 ABCA11PQ4W5N1 156 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 PIK3IP1Q96FE7 263 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 DMRTA2Q96SC8 542 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 NMES1Q9C002 83 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 PKD1L2Q7Z442 2459 aa24.5■■□□□ 1.51
CSNK1E-205ENST00000405675 HEATR1Q9H583 2144 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 RCC1P18754 421 aaPredicted RBP24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 ZNF146Q15072 292 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 PAN3Q58A45 887 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 ZNF880Q6PDB4 577 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 RELL2Q8NC24 303 aaPredicted RBP24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 PLPPR1Q8TBJ4 325 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 VKORC1Q9BQB6 163 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 METTL8Q9H825 291 aaKnown RBP24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 HES4Q9HCC6 221 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 SLC2A9Q9NRM0 540 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 TNFSF18Q9UNG2 199 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 CCKARP32238 428 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 MRGPRGQ86SM5 289 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 C1orf174Q8IYL3 243 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 RTN4IP1Q8WWV3 396 aaPredicted RBP24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 RSRP1Q9BUV0 290 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 TLNRD1Q9H1K6 362 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 NAA60Q9H7X0 242 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 MBD2Q9UBB5 411 aa24.49■■□□□ 1.51
CSNK1E-205ENST00000405675 KIR2DS1A0A191URI9 304 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 ACAA1P09110 424 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 KIR2DS4P43632 304 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 CEBPDP49716 269 aaPredicted RBP24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 KIR2DS1Q14954 304 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 SP6Q3SY56 376 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 SLC38A6Q8IZM9 456 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 OR8H3Q8N146 312 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 RND1Q92730 232 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 TMEM165Q9HC07 324 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 UFSP2Q9NUQ7 469 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 MEMO1Q9Y316 297 aa24.48■■□□□ 1.51
CSNK1E-205ENST00000405675 A0A1B0GWJ7 208 aa24.47■■□□□ 1.51
CSNK1E-205ENST00000405675 IFNA7P01567 189 aa24.47■■□□□ 1.51
CSNK1E-205ENST00000405675 RASL12Q9NYN1 266 aa24.47■■□□□ 1.51
CSNK1E-205ENST00000405675 DUSP13Q9UII6 198 aa24.47■■□□□ 1.51
CSNK1E-205ENST00000405675 TRAV39A0A0B4J263 110 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms