RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 P2RX3P56373 397 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 PAX5Q02548 391 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 PAX8Q06710 450 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 FAHD2BQ6P2I3 314 aaPredicted RBP24.2■■□□□ 1.46
USP42-202ENST00000404008 TPRX1Q8N7U7 411 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 FAHD2AQ96GK7 314 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 ABRACLQ9P1F3 81 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 ETV7Q9Y603 341 aa24.2■■□□□ 1.46
USP42-202ENST00000404008 NSD1Q96L73 2696 aaPredicted RBP24.2■■□□□ 1.46
USP42-202ENST00000404008 A0A1W2PQ09 198 aa24.19■■□□□ 1.46
USP42-202ENST00000404008 FOXI3A8MTJ6 420 aaPredicted RBP24.19■■□□□ 1.46
USP42-202ENST00000404008 CHATP28329 748 aa24.19■■□□□ 1.46
USP42-202ENST00000404008 RORCP51449 518 aa24.19■■□□□ 1.46
USP42-202ENST00000404008 FAM185AQ8N0U4 392 aa24.19■■□□□ 1.46
USP42-202ENST00000404008 OR5H6Q8NGV6 325 aa24.19■■□□□ 1.46
USP42-202ENST00000404008 TMPRSS13Q9BYE2 586 aa24.19■■□□□ 1.46
USP42-202ENST00000404008 MCRIP1C9JLW8 97 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 SOCS1O15524 211 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 GLAP06280 429 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 BLVRBP30043 206 aaPredicted RBP24.18■■□□□ 1.46
USP42-202ENST00000404008 VEGFCP49767 419 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 MEF2CQ06413 473 aaPredicted RBP24.18■■□□□ 1.46
USP42-202ENST00000404008 RBM39Q14498 530 aaKnown RBP24.18■■□□□ 1.46
USP42-202ENST00000404008 FAM189A2Q15884 450 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 KRBOX4Q5JUW0 171 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 TMEM200BQ69YZ2 307 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 Q71RC1 249 aaPredicted RBP24.18■■□□□ 1.46
USP42-202ENST00000404008 OR56B1Q8NGI3 324 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 PLPPR1Q8TBJ4 325 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 KCTD12Q96CX2 325 aaKnown RBP24.18■■□□□ 1.46
USP42-202ENST00000404008 NEDD4LQ96PU5 975 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 LPAR3Q9UBY5 353 aa24.18■■□□□ 1.46
USP42-202ENST00000404008 FUOMA2VDF0 154 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 CCDC160A6NGH7 325 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 GLIPR1P48060 266 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 NKAPLQ5M9Q1 402 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 RSBN1Q5VWQ0 802 aaPredicted RBP24.17■■□□□ 1.46
USP42-202ENST00000404008 NEK7Q8TDX7 302 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 CYYR1Q96J86 154 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 C7orf69Q9H7B7 122 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 SPATA2Q9UM82 520 aa24.17■■□□□ 1.46
USP42-202ENST00000404008 TEP1Q99973 2627 aaKnown RBP24.17■■□□□ 1.46
USP42-202ENST00000404008 CR1LQ2VPA4 569 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 TCF23Q7RTU1 214 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 C6orf201Q7Z4U5 140 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 KIR3DL3Q8N743 410 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 ING3Q9NXR8 418 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 ONECUT1Q9UBC0 465 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 hADV38S2A0JD32 116 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 ODAMA1E959 279 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 METTL21EPA6NDL7 271 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 TMEM50BP56557 158 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 ZNF273Q14593 569 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 RTN4RL2Q86UN3 420 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 SLC25A38Q96DW6 304 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 SULT4A1Q9BR01 284 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 ATG5Q9H1Y0 275 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 TMEM160Q9NX00 188 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 RHBDL2Q9NX52 303 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 RSL24D1Q9UHA3 163 aaKnown RBP24.16■■□□□ 1.46
USP42-202ENST00000404008 OPN4Q9UHM6 478 aa24.16■■□□□ 1.46
USP42-202ENST00000404008 ZNF701M0R085 212 aaPredicted RBP24.15■■□□□ 1.46
USP42-202ENST00000404008 AVPP01185 164 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 ARF6P62330 175 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 MOGAT2Q3SYC2 334 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 SLC35E4Q6ICL7 350 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 ZNF497Q6ZNH5 498 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 DYNC2LI1Q8TCX1 351 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 NCOR1P1Q9H4R4 102 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 KIF25Q9UIL4 384 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 HSF4Q9ULV5 492 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 KPTNQ9Y664 436 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 AUP1Q9Y679 476 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 LINC00312Q9Y6C7 94 aa24.15■■□□□ 1.46
USP42-202ENST00000404008 ANK3Q12955 4377 aaKnown RBP24.15■■□□□ 1.46
USP42-202ENST00000404008 SMIM31A0A1B0GVY4 71 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 A0A1W2PPH5 198 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 MEX3AA1L020 520 aaKnown RBP24.14■■□□□ 1.45
USP42-202ENST00000404008 UBE2QL1A1L167 161 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 RAB27BO00194 218 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 ZNF182P17025 639 aaPredicted RBP24.14■■□□□ 1.45
USP42-202ENST00000404008 C1orf229Q6ZS94 237 aaPredicted RBP24.14■■□□□ 1.45
USP42-202ENST00000404008 OR10R2Q8NGX6 335 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 ARHGAP5-AS1Q96IT6 56 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 FAAP24Q9BTP7 215 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 SIRPDQ9H106 197 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 PLEKHJ1Q9NW61 149 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 ETAA1Q9NY74 926 aa24.14■■□□□ 1.45
USP42-202ENST00000404008 HIVEP2P31629 2446 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 TMEM30CPA0ZSE6 113 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 MMP9P14780 707 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 DYNC1I2Q13409 638 aaKnown RBP24.13■■□□□ 1.45
USP42-202ENST00000404008 PLAC9Q5JTB6 97 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 FAM120AOSQ5T036 256 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 METTL11BQ5VVY1 283 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 CMTM4Q8IZR5 234 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 GAPTQ8N292 157 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 ACOT12Q8WYK0 555 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 DYRK2Q92630 601 aa24.13■■□□□ 1.45
USP42-202ENST00000404008 WDFY2Q96P53 400 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms