RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 LHX4Q969G2 390 aa11.26□□□□□ -0.61
VPREB1-202ENST00000403807 URM1Q9BTM9 101 aaKnown RBP11.26□□□□□ -0.61
VPREB1-202ENST00000403807 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
VPREB1-202ENST00000403807 MS4A7Q9GZW8 240 aaPredicted RBP11.26□□□□□ -0.61
VPREB1-202ENST00000403807 NCOR1P1Q9H4R4 102 aa11.26□□□□□ -0.61
VPREB1-202ENST00000403807 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
VPREB1-202ENST00000403807 METTL8Q9H825 291 aaKnown RBP11.26□□□□□ -0.61
VPREB1-202ENST00000403807 ING3Q9NXR8 418 aa11.26□□□□□ -0.61
VPREB1-202ENST00000403807 UBE2J1Q9Y385 318 aaPredicted RBP11.26□□□□□ -0.61
VPREB1-202ENST00000403807 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
VPREB1-202ENST00000403807 ZFHX3Q15911 3703 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 TRGV10A0A0A0MS01 117 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 ODAMA1E959 279 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 AIPO00170 330 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 GLAP06280 429 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF728P0DKX0 622 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 CCL3L1P16619 93 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 EPHA1P21709 976 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 CFPP27918 469 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 QRFPP83859 136 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 GUCA2AQ02747 115 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 MXD1Q05195 221 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 UNC119Q13432 240 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 RAB12Q6IQ22 244 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 BRICD5Q6PL45 260 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 METAP1DQ6UB28 335 aaPredicted RBP11.25□□□□□ -0.61
VPREB1-202ENST00000403807 TRAPPC6BQ86SZ2 158 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF565Q8N9K5 539 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 NEK7Q8TDX7 302 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 CORO2AQ92828 525 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 COQ2Q96H96 371 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 NEDD4LQ96PU5 975 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 FUNDC2Q9BWH2 189 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 TM2D1Q9BX74 207 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 UNKLQ9H9P5 680 aaKnown RBP11.25□□□□□ -0.61
VPREB1-202ENST00000403807 SIRT7Q9NRC8 400 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 OR6C3Q9NZP0 311 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 PEX16Q9Y5Y5 336 aa11.25□□□□□ -0.61
VPREB1-202ENST00000403807 SETD2Q9BYW2 2564 aaPredicted RBP11.25□□□□□ -0.61
VPREB1-202ENST00000403807 NSD1Q96L73 2696 aaPredicted RBP11.24□□□□□ -0.61
VPREB1-202ENST00000403807 NF1P21359 2839 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 IGHV3OR16-10A0A075B7F0 116 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 MEIKINA0A087WXM9 373 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 CENPVL3A0A0U1RRI6 287 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 C17orf98A8MV24 154 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 PDCD6O75340 191 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
VPREB1-202ENST00000403807 PAX5Q02548 391 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 FAM189A2Q15884 450 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 SLC35E4Q6ICL7 350 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 KCNK15Q9H427 330 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 HEXA-AS1Q9H8Q6 139 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 TAS2R3Q9NYW6 316 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF581Q9P0T4 197 aa11.24□□□□□ -0.61
VPREB1-202ENST00000403807 RCC2Q9P258 522 aaKnown RBP11.24□□□□□ -0.61
VPREB1-202ENST00000403807 TMEM272A0A1B0GTI8 110 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
VPREB1-202ENST00000403807 SMIM30A4D0T7 59 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 LDLRAD4O15165 306 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 RBP4P02753 201 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 TFAP2AP05549 437 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 BLVRBP30043 206 aaPredicted RBP11.23□□□□□ -0.61
VPREB1-202ENST00000403807 ALDH3B2P48448 385 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 DLX6P56179 175 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
VPREB1-202ENST00000403807 SIGIRRQ6IA17 410 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 NR2C2APQ86WQ0 139 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 CROCCP3Q8IVE0 287 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 PLPPR1Q8TBJ4 325 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 LPAR5Q9H1C0 372 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 GAL3ST2Q9H3Q3 398 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 ETAA1Q9NY74 926 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF69Q9UC07 566 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 DAPK2Q9UIK4 370 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 KIF25Q9UIL4 384 aa11.23□□□□□ -0.61
VPREB1-202ENST00000403807 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
VPREB1-202ENST00000403807 IGHV1-69DA0A0B4J2H0 117 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 ZNF729A6NN14 1252 aaPredicted RBP11.22□□□□□ -0.61
VPREB1-202ENST00000403807 TMEM127O75204 238 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 CA11O75493 328 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 IGHV1-69P01742 117 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 CLEC2LP0C7M8 214 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 SLC2A2P11168 524 aaPredicted RBP11.22□□□□□ -0.61
VPREB1-202ENST00000403807 GZMHP20718 246 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 UBE2E1P51965 193 aa11.22□□□□□ -0.61
VPREB1-202ENST00000403807 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms