RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZNF385CQ66K41 422 aaPredicted RBP12.07□□□□□ -0.48
APOB-202ENST00000399256 DBX2Q6ZNG2 339 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 THNSL2Q86YJ6 484 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
APOB-202ENST00000399256 ZNF501Q96CX3 271 aaPredicted RBP12.07□□□□□ -0.48
APOB-202ENST00000399256 MISP3Q96FF7 219 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 SLC7A10Q9NS82 523 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 P4HTMQ9NXG6 502 aa12.07□□□□□ -0.48
APOB-202ENST00000399256 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
APOB-202ENST00000399256 CHST1O43916 411 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 CNN3Q15417 329 aaKnown RBP12.06□□□□□ -0.48
APOB-202ENST00000399256 FAM90A2PQ658T7 463 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 C10orf35Q96D05 121 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 CA14Q9ULX7 337 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 A0A087WZY1 265 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 DHHO43323 396 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 HBE1P02100 147 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 MALLQ13021 153 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 SLC25A24Q6NUK1 477 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 UCN2Q96RP3 112 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 SPIN2AQ99865 258 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 SPIN2BQ9BPZ2 258 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 CLDN34H7C241 214 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 TERTO14746 1132 aaKnown RBP12.06□□□□□ -0.48
APOB-202ENST00000399256 IFNA10P01566 189 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 HLA-HP01893 362 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
APOB-202ENST00000399256 SRPXP78539 464 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 SSX2Q16385 188 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 Q6ZSR3 168 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 PLXDC1Q8IUK5 500 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 RNF138Q8WVD3 245 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 ZNF665Q9H7R5 613 aa12.06□□□□□ -0.48
APOB-202ENST00000399256 PDCD6O75340 191 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
APOB-202ENST00000399256 LCATP04180 440 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 SNRPCP09234 159 aaKnown RBP12.05□□□□□ -0.48
APOB-202ENST00000399256 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 ZNF818PQ6ZRF7 136 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 SIGLEC12Q96PQ1 595 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 ATP5SQ99766 215 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 B4DEV8 164 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 NPIPA2E9PIF3 369 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 NPIPA3F8WFD2 350 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 NRASP01111 189 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 IGLV3-19P01714 112 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 PATE4P0C8F1 98 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 HIST1H3AP68431 136 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 USF2Q15853 346 aaPredicted RBP12.05□□□□□ -0.48
APOB-202ENST00000399256 ZNF124Q15973 351 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 DNLZQ5SXM8 178 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 ZNF774Q6NX45 483 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 GAPTQ8N292 157 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 TMEM54Q969K7 222 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 TMEM56Q96MV1 263 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 CABLES2Q9BTV7 478 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 ULBP2Q9BZM5 246 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 MYOTQ9UBF9 498 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 WNT16Q9UBV4 365 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 TMEM56-RWDD3S4R434 201 aa12.05□□□□□ -0.48
APOB-202ENST00000399256 A0A1B0GU03 582 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 ARGFXA6NJG6 315 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 C9J4A7 227 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 LMO7DNF2Z398 122 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 DUX1O43812 170 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
APOB-202ENST00000399256 MMP9P14780 707 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 TCN2P20062 427 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 TAS2R30P59541 319 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 TMEM267Q0VDI3 215 aaPredicted RBP12.04□□□□□ -0.48
APOB-202ENST00000399256 LHFPL2Q6ZUX7 228 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 STX12Q86Y82 276 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 PLPPR1Q8TBJ4 325 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 RSG1Q9BU20 258 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 LRFN1Q9P244 771 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 COL6A3P12111 3177 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 IGLV3-32A0A0A0MS00 114 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 NR2C1P13056 603 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 CD81P60033 236 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 ZFP36L1Q07352 338 aaKnown RBP12.04□□□□□ -0.48
APOB-202ENST00000399256 NKAIN1Q4KMZ8 207 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 A0A1W2PR77 199 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 CEACAM1P13688 526 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 RND2P52198 227 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 OR5R1Q8NH85 324 aa12.04□□□□□ -0.48
APOB-202ENST00000399256 TIAF1O95411 115 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 CD55P08174 381 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 RPS18P62269 152 aaKnown RBP12.03□□□□□ -0.48
APOB-202ENST00000399256 ID3Q02535 119 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 BAXQ07812 192 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 EXT1Q16394 746 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 ZNF787Q6DD87 383 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 POM121Q96HA1 1249 aa12.03□□□□□ -0.48
APOB-202ENST00000399256 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms