RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 UBE2J1Q9Y385 318 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TRGV10A0A0A0MS01 117 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FUOMA2VDF0 154 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ZNF780AO75290 641 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CLPXO76031 633 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ARG1P05089 322 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 UCHL1P09936 223 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GTF2F2P13984 249 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CPEP16870 476 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SRMP19623 302 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 COMPP49747 757 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 LGALS4P56470 323 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 EMX1Q04741 257 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TBCEQ15813 527 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 HSD17B12Q53GQ0 312 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 AWAT1Q58HT5 328 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 NHLRC3Q5JS37 347 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 LDLRAD2Q5SZI1 272 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PRAMEF5Q5TYX0 476 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CDH26Q8IXH8 852 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 NKAIN3Q8N8D7 197 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SUMF2Q8NBJ7 301 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TMEM104Q8NE00 496 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 BANF2Q9H503 90 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 Q9H521 79 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ISYNA1Q9NPH2 558 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ACOT13Q9NPJ3 140 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TRAV39A0A0B4J263 110 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FAM172BPA6NC97 362 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CDK2P24941 298 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GDNFP39905 211 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 DYNC1I2Q13409 638 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ATAD3CQ5T2N8 411 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 BEND2Q8NDZ0 799 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CORO2AQ92828 525 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 DPCDQ9BVM2 203 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 DPAGT1Q9H3H5 408 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 IGHV2-26A0A0B4J1V2 119 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MEGF11A6BM72 1044 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ODF3BA8MYP8 253 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GPR137BO60478 399 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CRTAPO75718 401 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GLP1RP43220 463 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 RELBQ01201 579 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FABP5Q01469 135 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GPR176Q14439 515 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SSX1Q16384 188 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 C17orf58Q2M2W7 97 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 UTF1Q5T230 341 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 RSBN1Q5VWQ0 802 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ZNF626Q68DY1 528 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OR11H6Q8NGC7 330 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OR13A1Q8NGR1 328 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PHYHIPQ92561 330 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 DYRK2Q92630 601 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FAM46BQ96A09 425 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CYYR1Q96J86 154 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SSX3Q99909 188 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 UQCC2Q9BRT2 126 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 BARHL1Q9BZE3 327 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SELENOIQ9C0D9 397 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MEGF9Q9H1U4 602 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TMEM133Q9H2Q1 129 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GAL3ST2Q9H3Q3 398 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 IFT22Q9H7X7 185 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PCDHB16Q9NRJ7 776 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TAS2R3Q9NYW6 316 aa11.43□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FAM90A8PA6NJQ4 464 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 H3BUX3 64 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CRYBA1P05813 215 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MGMTP16455 207 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CFPP27918 469 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 FOXL1Q12952 345 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 PLA1AQ53H76 456 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OR10K2Q6IF99 312 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 HEPN1Q6WQI6 88 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 ZNF367Q7RTV3 350 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 C3orf56Q8N813 242 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 KCNK15Q9H427 330 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 C1RLQ9NZP8 487 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 VPREB3Q9UKI3 123 aa11.42□□□□□ -0.58
HLA-DQB1-202ENST00000399079 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CGB3P0DN86 165 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 CGB7P0DN87 165 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 JUNBP17275 347 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GABRA5P31644 462 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 RAB13P51153 203 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 TRAM1Q15629 374 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 SSX2Q16385 188 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 LY6EQ16553 131 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
HLA-DQB1-202ENST00000399079 GLT8D1Q68CQ7 371 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms