RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PDYNP01213 254 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 GTF2F2P13984 249 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 PSMB9P28065 219 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 MAGEA6P43360 314 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 ZNF83P51522 516 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 UBE2KP61086 200 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 PRKCDQ05655 676 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 FMODQ06828 376 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 CASP8Q14790 479 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 SYCP1Q15431 976 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 MMDQ15546 238 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 TMEM241Q24JQ0 296 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 ZCWPW2Q504Y3 356 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 TTMPQ5BVD1 217 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 PDZD11Q5EBL8 140 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 OR10J3Q5JRS4 329 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 SPIN3Q5JUX0 258 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 AMMECR1LQ6DCA0 310 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 USP50Q70EL3 339 aaPredicted RBP1.32□□□□□ -2.2
CD47-203ENST00000398258 LRRC6Q86X45 466 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 CALHM3Q86XJ0 350 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 ZNF738Q8NE65 137 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 ANGPTL6Q8NI99 470 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 CASTOR1Q8WTX7 329 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 CATSPER2Q96P56 530 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 CYTH2Q99418 400 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 EBPLQ9BY08 206 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 ZNF436Q9C0F3 470 aaPredicted RBP1.32□□□□□ -2.2
CD47-203ENST00000398258 SLC25A31Q9H0C2 315 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 IFT46Q9NQC8 304 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 HIVEP2P31629 2446 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 MAP3K19Q56UN5 1328 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 RAB3GAP2Q9H2M9 1393 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 SPATA31E1Q6ZUB1 1445 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 SSH2Q76I76 1423 aa1.32□□□□□ -2.2
CD47-203ENST00000398258 THADAQ6YHU6 1953 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 LTBP4Q8N2S1 1624 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 IGKV2-24A0A0C4DH68 120 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 A0A1B0GU33 70 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 A0A1W2PRG6 482 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 TMEM213A2RRL7 107 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 ZNF729A6NN14 1252 aaPredicted RBP1.31□□□□□ -2.2
CD47-203ENST00000398258 C8orf87E5RJ46 101 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 I3L4J1 428 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 K7ERS5 55 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 M0QXV9 152 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 UGT2B11O75310 529 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 IGKV1D-33P01593 117 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 IGKV1-33P01594 117 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 LGALS3P17931 250 aaKnown RBP1.31□□□□□ -2.2
CD47-203ENST00000398258 TGFBR2P37173 567 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 CD151P48509 253 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 FLOT2Q14254 428 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 SLC9A3R2Q15599 337 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 RBM48Q5RL73 367 aaKnown RBP1.31□□□□□ -2.2
CD47-203ENST00000398258 DGAT2L6Q6ZPD8 337 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 SYCE1Q8N0S2 351 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 MUC15Q8N387 334 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 BPIFB6Q8NFQ5 453 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 IFT81Q8WYA0 676 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 GTF2H4Q92759 462 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 MAL2Q969L2 176 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 APOBEC3DQ96AK3 386 aaPredicted RBP1.31□□□□□ -2.2
CD47-203ENST00000398258 CLDN23Q96B33 292 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 FXYD5Q96DB9 178 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 CMBLQ96DG6 245 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 MRAP2Q96G30 205 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 LINC01587Q99440 93 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 APOL4Q9BPW4 351 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 PRSS27Q9BQR3 290 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 PLA2G12AQ9BZM1 189 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 DUSP21Q9H596 190 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 ZNF443Q9Y2A4 671 aaPredicted RBP1.31□□□□□ -2.2
CD47-203ENST00000398258 TBL2Q9Y4P3 447 aaKnown RBP1.31□□□□□ -2.2
CD47-203ENST00000398258 GMEB1Q9Y692 573 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 ICOSQ9Y6W8 199 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 ABCB11O95342 1321 aa1.31□□□□□ -2.2
CD47-203ENST00000398258 TRAV8-2A0A0B4J237 113 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 D6RAR5 112 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 H3BP45 60 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 PHYHO14832 338 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 SLC31A1O15431 190 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 TRGV3P03979 118 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 OPN1SWP03999 348 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 LIMS3P0CW19 117 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 LIMS4P0CW20 117 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 MLNP12872 115 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 CASQ1P31415 396 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 INPP1P49441 399 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 KLF3P57682 345 aaPredicted RBP1.3□□□□□ -2.2
CD47-203ENST00000398258 RHOAP61586 193 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 FAM3AP98173 230 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 DHRS2Q13268 280 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 RAB31Q13636 194 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 TAF9Q16594 264 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 TIMM23BQ5SRD1 257 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 ZNF660Q6AZW8 331 aaPredicted RBP1.3□□□□□ -2.2
CD47-203ENST00000398258 SSX7Q7RTT5 188 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 TCF24Q7RTU0 167 aa1.3□□□□□ -2.2
CD47-203ENST00000398258 CPNE9Q8IYJ1 553 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms