RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 LHFPL5Q8TAF8 219 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 STOML3Q8TAV4 291 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 MICU1Q9BPX6 476 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 ELL3Q9HB65 397 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 RAB18Q9NP72 206 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 HEATR1Q9H583 2144 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 H0YL77 283 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 SOCS1O15524 211 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 ANGPTL7O43827 346 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 VAMP1P23763 118 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 SELENOVP59797 346 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 GNG3P63215 75 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 PDZK1IP1Q13113 114 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 SURF2Q15527 256 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 PAN3Q58A45 887 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 BEX5Q5H9J7 111 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 CALHM1Q8IU99 346 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 ADAD2Q8NCV1 583 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 OR10K1Q8NGX5 313 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 SEC22AQ96IW7 307 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 ARPC5LQ9BPX5 153 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 RTL8AQ9BWD3 113 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 FN3KRPQ9HA64 309 aa16.42■□□□□ 0.22
PDLIM2-204ENST00000397760 IGLV3-9A0A075B6K5 115 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 FOXI3A8MTJ6 420 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 SERPINE3A8MV23 424 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 CCSO14618 274 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 CD3EP07766 207 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 AKR1C4P17516 323 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 HAAOP46952 286 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 UQCC3Q6UW78 93 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 Q6ZR03 302 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 LHFPL1Q86WI0 220 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 OR5H2Q8NGV7 314 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 OR13G1Q8NGZ3 307 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 MARCH1Q8TCQ1 289 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 MRPL24Q96A35 216 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 TM2D1Q9BX74 207 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 MRPL37Q9BZE1 423 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 METTL9Q9H1A3 318 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 ZNF442Q9H7R0 627 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 BARX1Q9HBU1 254 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 MSL2Q9HCI7 577 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 CHMP1AQ9HD42 196 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 ADGRG4Q8IZF6 3080 aa16.41■□□□□ 0.22
PDLIM2-204ENST00000397760 SHISA9B4DS77 424 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 CRTAPO75718 401 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 SFT2D2O95562 160 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 ECI1P42126 302 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 LUMP51884 338 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 DMRTC2Q8IXT2 367 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 ZNF611Q8N823 705 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 MRPS24Q96EL2 167 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 ZNF471Q9BX82 626 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 BANF2Q9H503 90 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 CADP27708 2225 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 TEX13DA0A0J9YY54 714 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 A0A1W2PP11 408 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 F8VVB4 439 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 F8VWA3 439 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 MLNRO43193 412 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 LYL1P12980 280 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 RSU1Q15404 277 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 ASCL4Q6XD76 172 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 SLC25A26Q70HW3 274 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 ZNF573Q86YE8 665 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 OR10AD1Q8NGE0 317 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 OR51F2Q8NH61 342 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 CASTOR1Q8WTX7 329 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 WDR13Q9H1Z4 485 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 TAAR3PQ9P1P4 343 aa16.4■□□□□ 0.22
PDLIM2-204ENST00000397760 IGKV1-12A0A0C4DH73 117 aa16.39■□□□□ 0.21
PDLIM2-204ENST00000397760 SIAH2O43255 324 aa16.39■□□□□ 0.21
PDLIM2-204ENST00000397760 IGKV1D-12P01611 117 aa16.39■□□□□ 0.21
PDLIM2-204ENST00000397760 SERPINA2P20848 420 aa16.39■□□□□ 0.21
PDLIM2-204ENST00000397760 C5orf66Q9H5L9 145 aa16.39■□□□□ 0.21
PDLIM2-204ENST00000397760 MBD2Q9UBB5 411 aa16.39■□□□□ 0.21
PDLIM2-204ENST00000397760 A0A1B0GWJ7 208 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 C5orf51A6NDU8 294 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 VSTM5A8MXK1 200 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 FAM25EA8MYX2 175 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 OR4A8P0C604 315 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 SERPINF1P36955 418 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 ADIPOQQ15848 244 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 LRRC37A5PQ49AS3 106 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 HAGHLQ6PII5 290 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 KCTD9Q7L273 389 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 ZSCAN4Q8NAM6 433 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 ARHGAP5-AS1Q96IT6 56 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 CXXC4Q9H2H0 198 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 OR51I2Q9H344 312 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 RNF115Q9Y4L5 304 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 RAB19A4D1S5 217 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 NUDT19A8MXV4 375 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 F5H0A9 414 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 TEX46H3BTG2 121 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 HTR3BO95264 441 aa16.38■□□□□ 0.21
PDLIM2-204ENST00000397760 CSTBP04080 98 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms