RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 MOB3BQ86TA1 216 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 MEGF10Q96KG7 1140 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 SNX22Q96L94 193 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 CCL13Q99616 98 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 NXF2Q9GZY0 626 aaKnown RBP7.1□□□□□ -1.27
PTPRD-204ENST00000397606 DKK4Q9UBT3 224 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 V9GYH0 126 aa7.1□□□□□ -1.27
PTPRD-204ENST00000397606 IGHV1-18A0A0C4DH31 117 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 DEFB108AA8MXU0 73 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 PMELP40967 661 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ATP5J2P56134 94 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 C4orf17Q53FE4 359 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 OR4A4PQ8NGN8 299 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 OR10Z1Q8NGY1 313 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 NEU4Q8WWR8 484 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-204ENST00000397606 RGP1Q92546 391 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-204ENST00000397606 TMEM246Q9BRR3 403 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF436Q9C0F3 470 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-204ENST00000397606 CEP192Q8TEP8 1941 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 OR2H2O95918 312 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 MMP7P09237 267 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-204ENST00000397606 COX7A1P24310 79 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 SUB1P53999 127 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTPRD-204ENST00000397606 RAG2P55895 527 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 AESQ08117 197 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 AKR1C8PQ5T2L2 129 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 S100A7AQ86SG5 101 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 OR10S1Q8NGN2 331 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 LILRB4Q8NHJ6 448 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ADTRPQ96IZ2 230 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF251Q9BRH9 671 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 COMMD5Q9GZQ3 224 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 UBQLN2Q9UHD9 624 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ESPL1Q14674 2120 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 MYO7BQ6PIF6 2116 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 A0A1W2PP11 408 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 GYPAP02724 150 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 IL5P05113 134 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ACKR3P25106 362 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 CEBPGP53567 150 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 FHL1Q13642 323 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 FGFBP3Q8TAT2 258 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 SOX7Q9BT81 388 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 RANGRFQ9HD47 186 aaPredicted RBP7.09□□□□□ -1.27
PTPRD-204ENST00000397606 ZNF355PQ9NSJ1 428 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 HSF4Q9ULV5 492 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 IGHV3-43A0A0B4J1X8 118 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 A0A0D9SG52 128 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 PYCARD-AS1I3L0S3 204 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 HRASP01112 189 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 IGHV3-43DP0DP04 118 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 CCL1P22362 96 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 SSX9Q7RTT3 188 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 HOGA1Q86XE5 327 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 CCL19Q99731 98 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 SLC25A15Q9Y619 301 aa7.09□□□□□ -1.27
PTPRD-204ENST00000397606 BOLA2-SMG1P6H3BVE0 249 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 MUC1P15941 1255 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 MPV17P39210 176 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 VMA21Q3ZAQ7 101 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 C9orf152Q5JTZ5 239 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 FOXL2NBQ6ZUU3 175 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 WBP1Q96G27 269 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 OR2D2Q9H210 308 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 PPIL3Q9H2H8 161 aaKnown RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 OCEL1Q9H607 264 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 FREM3P0C091 2139 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 GIPP09681 153 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 DEFA4P12838 97 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 TPT1P13693 172 aaKnown RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 S100A7P31151 101 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 ZNF154Q13106 437 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 AKIRIN2Q53H80 203 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 ZBTB8BQ8NAP8 495 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 AQP3Q92482 292 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 MARS2Q96GW9 593 aaKnown RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 TSNAXQ99598 290 aaKnown RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 PIMREGQ9BSJ6 248 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 SHARPINQ9H0F6 387 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 MBD2Q9UBB5 411 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 MIOXQ9UGB7 285 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 C17orf100A8MU93 164 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 PDLIM4P50479 330 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 MRPS11P82912 194 aaKnown RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 Q3ZCU0 254 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 SHEQ5VZ18 495 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 OR13C8Q8NGS7 320 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 OR13D1Q8NGV5 346 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 TMEM14DPA8MWL7 114 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 PRR32B1ATL7 298 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 TSPAN9O75954 239 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 CYB5R3P00387 301 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 KIR2DS2P43631 304 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 RPS11P62280 158 aaKnown RBP eCLIP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 PLA2G7Q13093 441 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 PDLIM3Q53GG5 364 aaPredicted RBP7.08□□□□□ -1.28
PTPRD-204ENST00000397606 SEZ6L2Q6UXD5 910 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 ASB13Q8WXK3 278 aa7.08□□□□□ -1.28
PTPRD-204ENST00000397606 Q96M66 194 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms