RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CSMD2Q7Z408 3487 aa17.69■□□□□ 0.42
CPNE1-204ENST00000397443 PLA2G10O15496 165 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 CD3DP04234 171 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 FCGR3AP08637 254 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 KLF9Q13886 244 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-204ENST00000397443 LYPD2Q6UXB3 125 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 Q6ZPA2 131 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 PEG10Q86TG7 708 aaKnown RBP17.68■□□□□ 0.42
CPNE1-204ENST00000397443 IGFBPL1Q8WX77 278 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 COX4I2Q96KJ9 171 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 SHARPINQ9H0F6 387 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 C11orf54Q9H0W9 315 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-204ENST00000397443 SSX4O60224 188 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF737O75373 536 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 MT-ND4P03905 459 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 CSN2P05814 226 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 DEFA1P59665 94 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 DEFA3P59666 94 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 SNAPC3Q92966 411 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 OCSTAMPQ9BR26 566 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 TMEM246Q9BRR3 403 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 NARFLQ9H6Q4 476 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF665Q9H7R5 613 aa17.68■□□□□ 0.42
CPNE1-204ENST00000397443 ANKRD20A5PA0PJZ0 165 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 M0QYG6 137 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 CA11O75493 328 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 IGHV4-39P01824 125 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 CSF1P09603 554 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 GSTT2BP0CG30 244 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 RCVRNP35243 200 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 C5orf24Q7Z6I8 188 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 FGFRL1Q8N441 504 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF525Q8N782 197 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 BEST4Q8NFU0 473 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 OR4D10Q8NGI6 311 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 MCUBQ9NWR8 336 aa17.67■□□□□ 0.42
CPNE1-204ENST00000397443 IGKV1D-8A0A087WSZ0 117 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 NKX6-3A6NJ46 265 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ADAM20O43506 726 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ECDO95905 644 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-204ENST00000397443 GLAP06280 429 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 SSTR2P30874 369 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 CBX5P45973 191 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 AP3S2P59780 193 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF788Q6ZQV5 615 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF561Q8N587 486 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 CHODLQ9H9P2 273 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 MYOZ1Q9NP98 299 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ANKRD17O75179 2603 aaKnown RBP17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF736B4DX44 427 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-204ENST00000397443 LYRM1O43325 122 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 TK1P04183 234 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 IL13RA1P78552 427 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 MRPS11P82912 194 aaKnown RBP17.66■□□□□ 0.42
CPNE1-204ENST00000397443 RGS21Q2M5E4 152 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 KRBOX4Q5JUW0 171 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 ZNF497Q6ZNH5 498 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 HOGA1Q86XE5 327 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 MRPL30Q8TCC3 161 aaKnown RBP17.66■□□□□ 0.42
CPNE1-204ENST00000397443 SDSLQ96GA7 329 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 COQ2Q96H96 371 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 SNX22Q96L94 193 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 TAS2R8Q9NYW2 309 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 KIF25Q9UIL4 384 aa17.66■□□□□ 0.42
CPNE1-204ENST00000397443 K7N7A8 449 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 NAPSAO96009 420 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 PMP2P02689 132 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 RCC1P18754 421 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-204ENST00000397443 HRH1P35367 487 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 MDH2P40926 338 aaKnown RBP17.65■□□□□ 0.42
CPNE1-204ENST00000397443 GLIPR1P48060 266 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 ATP5J2P56134 94 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 EDDM3BP56851 147 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 ASAH1Q13510 395 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 PERPQ96FX8 193 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 TIMD4Q96H15 378 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 HRASLSQ9HDD0 168 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 TRAPPC2LQ9UL33 140 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 HECTD1Q9ULT8 2610 aa17.65■□□□□ 0.42
CPNE1-204ENST00000397443 SIGLEC5O15389 551 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 IGHV2-70P01814 119 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 DTYMKP23919 212 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 RFX2P48378 723 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 TAS2R19P59542 299 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 SSBP1Q04837 148 aaKnown RBP17.64■□□□□ 0.42
CPNE1-204ENST00000397443 RSBN1Q5VWQ0 802 aaPredicted RBP17.64■□□□□ 0.42
CPNE1-204ENST00000397443 STEAP1BQ6NZ63 245 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 OR4C16Q8NGL9 310 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 RAB1CQ92928 201 aa17.64■□□□□ 0.42
CPNE1-204ENST00000397443 TINAGL1Q9GZM7 467 aaPredicted RBP17.64■□□□□ 0.42
CPNE1-204ENST00000397443 MEIKINA0A087WXM9 373 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 NDUFB7P17568 137 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 GDPD3Q7L5L3 318 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 SLC36A1Q7Z2H8 476 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 TMEM229BQ8NBD8 167 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 OR56B4Q8NH76 319 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 PPP1R35Q8TAP8 253 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 UBALD1Q8TB05 177 aa17.64■□□□□ 0.41
CPNE1-204ENST00000397443 MAP1AP78559 2803 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-204ENST00000397443 ASH1LQ9NR48 2969 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms