RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 Q71RC1 249 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 PERPQ96FX8 193 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 SDSLQ96GA7 329 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 C18orf12Q96KH6 178 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 HDHD3Q9BSH5 251 aaPredicted RBP14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 ANAPC10Q9UM13 185 aa14.13□□□□□ -0.15
TSPAN4-205ENST00000397406 NIPBLQ6KC79 2804 aaeCLIP14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF737O75373 536 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 RBBP9O75884 186 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 IGHV2-70P01814 119 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 IGHV4-39P01824 125 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 GABRA2P47869 451 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 OR3A1P47881 315 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 BTG1P62324 171 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 SSBP1Q04837 148 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 ATPAF1Q5TC12 328 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 TRIQKQ629K1 86 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 DCDC5Q6ZRR9 648 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 Q96MF0 132 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 GAFA1Q96PS6 74 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 CMSS1Q9BQ75 279 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 OCSTAMPQ9BR26 566 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 GSX2Q9BZM3 304 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 SHARPINQ9H0F6 387 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 PPA2Q9H2U2 334 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 CHODLQ9H9P2 273 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 TMEM165Q9HC07 324 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF701Q9NV72 531 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 MAB21L2Q9Y586 359 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 DSCAML1Q8TD84 2053 aa14.12□□□□□ -0.15
TSPAN4-205ENST00000397406 NAPSAO96009 420 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 PAX1P15863 534 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 Q6ZPA2 131 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 GVQW1Q8N7I0 195 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 OR4S1Q8NGB4 309 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 PLPPR1Q8TBJ4 325 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 NEK7Q8TDX7 302 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 COX4I2Q96KJ9 171 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 SNX22Q96L94 193 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 TMEM246Q9BRR3 403 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 CHST6Q9GZX3 395 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 DNTTIP1Q9H147 329 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF665Q9H7R5 613 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 ETAA1Q9NY74 926 aa14.11□□□□□ -0.15
TSPAN4-205ENST00000397406 A0A1B0GW55 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ANKRD20A5PA0PJZ0 165 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 CSN2P05814 226 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 FCGR3AP08637 254 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L2P0CJ85 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L3P0CJ86 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L4P0CJ87 422 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L5P0CJ88 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L6P0CJ89 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L7P0CJ90 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 MDH2P40926 338 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 CBX5P45973 191 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 KCNJ3P48549 501 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ACTBP60709 375 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ACTG1P63261 375 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 KLF9Q13886 244 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ATXN7L3Q14CW9 347 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4L9Q6RFH8 374 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 PRSS57Q6UWY2 283 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 GAPTQ8N292 157 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF561Q8N587 486 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ASCC1Q8N9N2 400 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNRF1Q8ND25 227 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 CCL13Q99616 98 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 MYOZ1Q9NP98 299 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 C12orf4Q9NQ89 552 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 DUX4Q9UBX2 424 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 TBC1D24Q9ULP9 559 aa14.1□□□□□ -0.15
TSPAN4-205ENST00000397406 H7C1Q1 480 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 K7N7A8 449 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 SIGLEC5O15389 551 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 SELLP14151 372 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 NAT1P18440 290 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 DTYMKP23919 212 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 RCVRNP35243 200 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 TMEM33P57088 247 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 PAX5Q02548 391 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 RSBN1Q5VWQ0 802 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF497Q6ZNH5 498 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 PEG10Q86TG7 708 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 FAM216BQ8N7L0 139 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 MRPL30Q8TCC3 161 aaKnown RBP14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 COQ2Q96H96 371 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 IFT46Q9NQC8 304 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 ZNF230Q9UIE0 474 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 ARID1AO14497 2285 aa14.09□□□□□ -0.15
TSPAN4-205ENST00000397406 TRBV6-6A0A0A6YYG2 114 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 ISPDA4D126 451 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 NKX6-3A6NJ46 265 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 PLA2G10O15496 165 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 LY6G6DO95868 133 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 TK1P04183 234 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 FCER2P06734 321 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 IL13RA1P78552 427 aa14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 MRPS15P82914 257 aaKnown RBP14.08□□□□□ -0.15
TSPAN4-205ENST00000397406 GRK1Q15835 563 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms