RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 GABARAPL3Q9BY60 117 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 CHD4Q14839 1912 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 SPEF2Q9C093 1822 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 IGHV3-21A0A0B4J1V1 117 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 TRAV1-2A0A0B4J238 106 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 CLDN34H7C241 214 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 CORTO00230 105 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 NKX2-8O15522 239 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 GAPDHP04406 335 aaKnown RBP6.34□□□□□ -1.39
UPF2-203ENST00000397053 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
UPF2-203ENST00000397053 CTLA4P16410 223 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 P2RY6Q15077 328 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 SMUG1Q53HV7 270 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 UNQ5815/PRO19632Q6UWF5 114 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 OR4A5Q8NH83 315 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 ZNF418Q8TF45 676 aaPredicted RBP6.34□□□□□ -1.39
UPF2-203ENST00000397053 TMEM174Q8WUU8 243 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 PTX4Q96A99 478 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 MOGAT1Q96PD6 335 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 OR2J1Q9GZK6 312 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 FGF20Q9NP95 211 aaPredicted RBP6.34□□□□□ -1.39
UPF2-203ENST00000397053 ANXA10Q9UJ72 324 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 ATG2BQ96BY7 2078 aa6.34□□□□□ -1.39
UPF2-203ENST00000397053 CXorf51AA0A1B0GTR3 108 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 ADRA2AP08913 450 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 CEBPDP49716 269 aaPredicted RBP6.34□□□□□ -1.4
UPF2-203ENST00000397053 TCL1AP56279 114 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 BAK1Q16611 211 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 WDR73Q6P4I2 378 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 ZNF841Q6ZN19 808 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 OR4P4Q8NGL7 312 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 MYOZ3Q8TDC0 251 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 CACNA1IQ9P0X4 2223 aa6.34□□□□□ -1.4
UPF2-203ENST00000397053 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 IGHV5-10-1A0A0J9YXX1 117 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 PLPP3O14495 311 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 WNT9BO14905 357 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZNF737O75373 536 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 CST4P01036 141 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 WNT5AP41221 380 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 TSPAN7P41732 249 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 RPL27AP46776 148 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 LY6EQ16553 131 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SLC25A35Q3KQZ1 300 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 MAVSQ7Z434 540 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 GUCD1Q96NT3 240 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 GSX1Q9H4S2 264 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZNF275Q9NSD4 429 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 DNAJB12Q9NXW2 375 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 IL20Q9NYY1 176 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 MDC1Q14676 2089 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 SETD1AO15047 1707 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 UBR1Q8IWV7 1749 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 MYH9P35579 1960 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 IGHV3OR15-7A0A075B7D8 119 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 IGKV3OR2-268A0A0C4DH90 116 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ARRDC5A6NEK1 342 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 CDRT15L2A8MXV6 281 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 TGFBR1P36897 503 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SELENOPP49908 381 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 GUK1Q16774 197 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 RPEL1Q2QD12 228 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 LINC00303Q3SY05 128 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 C10orf113Q5VZT2 155 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 D2HGDHQ8N465 521 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 TMEM191AQ9H0A3 160 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 PARD6AQ9NPB6 346 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SPTBP11277 2137 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 MYO5BQ9ULV0 1848 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 TCRBV5S1A1TA0A578 114 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SYNGR1O43759 233 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 CA11O75493 328 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZFPL1O95159 310 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZNF735P0CB33 412 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 PMELP40967 661 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 LSM6P62312 80 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 RPS4XP62701 263 aaKnown RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 B4GALNT1Q00973 533 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SPRED3Q2MJR0 410 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 PRICKLE4Q2TBC4 344 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZNF770Q6IQ21 691 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 CALHM1Q8IU99 346 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZDHHC22Q8N966 263 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 SYT8Q8NBV8 401 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 OR4C5Q8NGB2 326 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 OR52B4Q8NGK2 314 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZNF502Q8TBZ5 544 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 C10orf90Q96M02 699 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 ZNF256Q9Y2P7 627 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 DOPEY1Q5JWR5 2465 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 B4E171 279 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 CISD3P0C7P0 127 aa6.33□□□□□ -1.4
UPF2-203ENST00000397053 HOXB3P14651 431 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 JUNBP17275 347 aaPredicted RBP6.33□□□□□ -1.4
UPF2-203ENST00000397053 MAS1LP35410 378 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms