RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 K7EM74 188 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 BET1O15155 118 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 SCTP09683 121 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 S100A10P60903 97 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 ERVK11-1P61568 191 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 HLA-DRB3P79483 266 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 IL15RAQ13261 267 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 GGNBP1Q5YKI7 109 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 Q6P435 159 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 OR8G5Q8NG78 346 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 MRPL24Q96A35 216 aaKnown RBP12.71□□□□□ -0.37
CBX3-202ENST00000396386 NRIP2Q9BQI9 281 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 TMEM100Q9NV29 134 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 LUZP4Q9P127 313 aa12.71□□□□□ -0.37
CBX3-202ENST00000396386 IGHV2OR16-5A0A0B4J2B6 119 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 IGHV1-18A0A0C4DH31 117 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 hCG_1807616A0A1W2PRN6 198 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 MED19A0JLT2 244 aaPredicted RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 POM121CA8CG34 1229 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 F5H0A9 414 aaPredicted RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 TIMM8AO60220 97 aaPredicted RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 NXPH2O95156 264 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 KITLGP21583 273 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 HERPUD1Q15011 391 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 ZNF880Q6PDB4 577 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 FAM180AQ6UWF9 173 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 LIAT1Q6ZQX7 453 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 ZNF565Q8N9K5 539 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 PHYHIPLQ96FC7 376 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 FBXO9Q9UK97 447 aaPredicted RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 CACNA1BQ00975 2339 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 H0YL77 283 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 SP6Q3SY56 376 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 C1orf174Q8IYL3 243 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 LGI3Q8N145 548 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 OR4A4PQ8NGN8 299 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 RRNAD1Q96FB5 475 aaKnown RBP12.7□□□□□ -0.38
CBX3-202ENST00000396386 CXorf58Q96LI9 332 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 CXXC4Q9H2H0 198 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 MED9Q9NWA0 146 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 DNAJB11Q9UBS4 358 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 TUBD1Q9UJT1 453 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 SLC25A15Q9Y619 301 aa12.7□□□□□ -0.38
CBX3-202ENST00000396386 CHD8Q9HCK8 2581 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
CBX3-202ENST00000396386 C3orf80F5H4A9 247 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 H7C1Q1 480 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 SIRPB1O00241 398 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 CDIPTO14735 213 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 MLNRO43193 412 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 TUSC2O75896 110 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 GRPP07492 148 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 GCH1P30793 250 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 RND3P61587 244 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 SRPXP78539 464 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 FOXC1Q12948 553 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 SMCO1Q147U7 214 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 AANATQ16613 207 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 ZNF718Q3SXZ3 478 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 SPIN3Q5JUX0 258 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 PDZD9Q8IXQ8 264 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 SECTM1Q8WVN6 248 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 AQP10Q96PS8 301 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 SLC25A32Q9H2D1 315 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 TREM2Q9NZC2 230 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 PFDN2Q9UHV9 154 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 ZFHX4Q86UP3 3567 aa12.69□□□□□ -0.38
CBX3-202ENST00000396386 IGKV1-6A0A0C4DH72 117 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 A0A1B0GW55 424 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 I3L521 148 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 SLC33A1O00400 549 aaPredicted RBP12.68□□□□□ -0.38
CBX3-202ENST00000396386 PHF1O43189 567 aaPredicted RBP12.68□□□□□ -0.38
CBX3-202ENST00000396386 KCNAB3O43448 404 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 OR2H2O95918 312 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 ACAA1P09110 424 aaPredicted RBP12.68□□□□□ -0.38
CBX3-202ENST00000396386 DUX4L2P0CJ85 424 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 DUX4L3P0CJ86 424 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 DUX4L4P0CJ87 422 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 DUX4L5P0CJ88 424 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 DUX4L6P0CJ89 424 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 DUX4L7P0CJ90 424 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 TIMP3P35625 211 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 ZNF146Q15072 292 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 MBNL2Q5VZF2 373 aaKnown RBP12.68□□□□□ -0.38
CBX3-202ENST00000396386 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
CBX3-202ENST00000396386 OR1S1Q8NH92 325 aa12.68□□□□□ -0.38
CBX3-202ENST00000396386 STOML3Q8TAV4 291 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms