RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 OCSTAMPQ9BR26 566 aa13.11□□□□□ -0.31
DDR1-229ENST00000396342 RAB9BQ9NP90 201 aa13.11□□□□□ -0.31
DDR1-229ENST00000396342 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
DDR1-229ENST00000396342 MYRFQ9Y2G1 1151 aa13.11□□□□□ -0.31
DDR1-229ENST00000396342 PSMB11A5LHX3 300 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 SLC33A1O00400 549 aaPredicted RBP13.1□□□□□ -0.31
DDR1-229ENST00000396342 HSPB6O14558 160 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 EI24O14681 340 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 ALPLP05186 524 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 RAB7AP51149 207 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 MED21Q13503 144 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 DEFB121Q5J5C9 76 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 LHFPL3Q86UP9 236 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 WFDC9Q8NEX5 89 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 CHPT1Q8WUD6 406 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 TNFAIP8L1Q8WVP5 186 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 PYDC1Q8WXC3 89 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 MYDGFQ969H8 173 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 MCRIP2Q9BUT9 160 aaKnown RBP13.1□□□□□ -0.31
DDR1-229ENST00000396342 ZNF286AQ9HBT8 521 aa13.1□□□□□ -0.31
DDR1-229ENST00000396342 AURKAIP1Q9NWT8 199 aaPredicted RBP13.1□□□□□ -0.31
DDR1-229ENST00000396342 EXOGQ9Y2C4 368 aaKnown RBP13.1□□□□□ -0.31
DDR1-229ENST00000396342 RPL36Q9Y3U8 105 aaKnown RBP13.1□□□□□ -0.31
DDR1-229ENST00000396342 OR4C45A6NMZ5 311 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 MMP23AO75900 390 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 MPIG6BO95866 241 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 IGLV1-47P01700 117 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 IGLL1P15814 213 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 TMEM11P17152 192 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 JUNBP17275 347 aaPredicted RBP13.09□□□□□ -0.31
DDR1-229ENST00000396342 NANOS3P60323 173 aaKnown RBP13.09□□□□□ -0.31
DDR1-229ENST00000396342 RAB40BQ12829 278 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 LDLRAD2Q5SZI1 272 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 TMPRSS11AQ6ZMR5 421 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 THNSL2Q86YJ6 484 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 FOXRED2Q8IWF2 684 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 OR51A4Q8NGJ6 313 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 ZNF649Q9BS31 505 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 C9orf16Q9BUW7 83 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 GON7Q9BXV9 100 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 NCOR1P1Q9H4R4 102 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
DDR1-229ENST00000396342 CALYQ9NYX4 217 aa13.09□□□□□ -0.31
DDR1-229ENST00000396342 IGKV1-12A0A0C4DH73 117 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 SERPINE3A8MV23 424 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 IGKV1D-12P01611 117 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 IL3RAP26951 378 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 SLC6A1P30531 599 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 IL13RA2Q14627 380 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 LPCAT4Q643R3 524 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 Q6ZS46 218 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 OR8H3Q8N146 312 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 OSR2Q8N2R0 312 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 STX19Q8N4C7 294 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 PARP16Q8N5Y8 322 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 PXT1Q8NFP0 134 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 OR10A7Q8NGE5 316 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 CNIH3Q8TBE1 160 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 NEK7Q8TDX7 302 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 CHCHD3Q9NX63 227 aaKnown RBP13.08□□□□□ -0.32
DDR1-229ENST00000396342 IDI2-AS1Q9NZ38 188 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 CKLFQ9UBR5 152 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 KIF25Q9UIL4 384 aa13.08□□□□□ -0.32
DDR1-229ENST00000396342 A0A087X0M5 115 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 A0A1B0GX30 115 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 IRGMA1A4Y4 181 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 J3QR06 171 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 HTR3BO95264 441 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 IL1AP01583 271 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 GZMHP20718 246 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 LTC4SQ16873 150 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 ELP2Q6IA86 826 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 CBR4Q8N4T8 237 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 COMMD1Q8N668 190 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 OR51T1Q8NGJ9 327 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 OR10AC1Q8NH08 325 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 GPR148Q8TDV2 347 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 WIPF2Q8TF74 440 aaPredicted RBP13.07□□□□□ -0.32
DDR1-229ENST00000396342 METTL9Q9H1A3 318 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 ING4Q9UNL4 249 aa13.07□□□□□ -0.32
DDR1-229ENST00000396342 ADARB2-AS1A8MUL3 147 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 J3QRE1 110 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 ZNF780AO75290 641 aaPredicted RBP13.06□□□□□ -0.32
DDR1-229ENST00000396342 ZFPL1O95159 310 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 SNRNP70P08621 437 aaKnown RBP13.06□□□□□ -0.32
DDR1-229ENST00000396342 ZSCAN26Q16670 478 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 Q6P435 159 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 OR56B4Q8NH76 319 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 COQ2Q96H96 371 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 KIRREL1Q96J84 757 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 JAM3Q9BX67 310 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 ZFP57Q9NU63 452 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 ERVK13-1Q9NX77 482 aa13.06□□□□□ -0.32
DDR1-229ENST00000396342 NCBP2LA6PVI3 153 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms