RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TMEM56Q96MV1 263 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 OR51B6Q9H340 312 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 LPAR3Q9UBY5 353 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 TMEM56-RWDD3S4R434 201 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 IGKV1-6A0A0C4DH72 117 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 LRP5LA4QPB2 252 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 GPR31O00270 319 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 BET1O15155 118 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 JTBO76095 146 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 SLC34A2O95436 690 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 WT1P19544 449 aaPredicted RBP14.31□□□□□ -0.12
NUP50-202ENST00000396096 IL32P24001 234 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 PPP1CBP62140 327 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 GABRA6Q16445 453 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 MST1LQ2TV78 715 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 SPERTQ8NA61 448 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 NEK7Q8TDX7 302 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 SMIM8Q96KF7 97 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 TAF9BQ9HBM6 251 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 CDH20Q9HBT6 801 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 OR2S2Q9NQN1 319 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 ZC4H2Q9NQZ6 224 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 FBXL17Q9UF56 701 aa14.31□□□□□ -0.12
NUP50-202ENST00000396096 OTOGLQ3ZCN5 2332 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 ESPL1Q14674 2120 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 CDS2O95674 445 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 CELA3BP08861 270 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 RAC2P15153 192 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 SPATA46Q5T0L3 261 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 GPR157Q5UAW9 335 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 Q6P435 159 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 Q8IYB0 196 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 ZNF565Q8N9K5 539 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 OR4D5Q8NGN0 318 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 TRIB1Q96RU8 372 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 MMP26Q9NRE1 261 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 DLL3Q9NYJ7 618 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 CACNA1HO95180 2353 aa14.3□□□□□ -0.12
NUP50-202ENST00000396096 DUXBA0A1W2PPF3 345 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 RHBDL1O75783 438 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 SCGB1D2O95969 90 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 P2RY1P47900 373 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 TMEM33P57088 247 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 ERVK11-1P61568 191 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 PCSK4Q6UW60 755 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 IL34Q6ZMJ4 242 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 WDR86Q86TI4 376 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 TBC1D26Q86UD7 250 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 SLC35G3Q8N808 338 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 OR4A4PQ8NGN8 299 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 CABLES2Q9BTV7 478 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 ARV1Q9H2C2 271 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 TREM2Q9NZC2 230 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 PTPRBP23467 1997 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 IQCF6A8MYZ5 107 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 ST8SIA3O43173 380 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 GPR137BO60478 399 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 COX5AP20674 150 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 MDH2P40926 338 aaKnown RBP14.29□□□□□ -0.12
NUP50-202ENST00000396096 SULT1A2P50226 295 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 HLA-DRB3P79483 266 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 SHEQ5VZ18 495 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 C20orf204Q6ZNR8 217 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 ZNF818PQ6ZRF7 136 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 C5orf24Q7Z6I8 188 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 UBAC2Q8NBM4 344 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 C1orf162Q8NEQ5 155 aaPredicted RBP14.29□□□□□ -0.12
NUP50-202ENST00000396096 OR52M1Q8NGK5 317 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 SECTM1Q8WVN6 248 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 WNT2BQ93097 391 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 USB1Q9BQ65 265 aaKnown RBP14.29□□□□□ -0.12
NUP50-202ENST00000396096 OR2J1Q9GZK6 312 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 MS4A7Q9GZW8 240 aaPredicted RBP14.29□□□□□ -0.12
NUP50-202ENST00000396096 COQ3Q9NZJ6 369 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 POLDIP2Q9Y2S7 368 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 POMT1Q9Y6A1 747 aa14.29□□□□□ -0.12
NUP50-202ENST00000396096 IGKV1D-13A0A0B4J2D9 117 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 ZNF705EA8MWA4 302 aaPredicted RBP14.28□□□□□ -0.12
NUP50-202ENST00000396096 NPIPB11E5RHQ5 1161 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 HSPB6O14558 160 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 CEACAM4O75871 244 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 APOC3P02656 99 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 IGKV1-13P0DP09 117 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 GLI4P10075 376 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 CBR1P16152 277 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 SELEP16581 610 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 IDH3GP51553 393 aaPredicted RBP14.28□□□□□ -0.12
NUP50-202ENST00000396096 BTN1A1Q13410 526 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 GCNT2Q8N0V5 402 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 GAPTQ8N292 157 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 C17orf78Q8N4C9 275 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 SARAFQ96BY9 339 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 ZNF318Q5VUA4 2279 aa14.28□□□□□ -0.12
NUP50-202ENST00000396096 FAM186AA6NE01 2351 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 DEGS1O15121 323 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 LYZL6O75951 148 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 RCC1P18754 421 aaPredicted RBP14.27□□□□□ -0.12
NUP50-202ENST00000396096 UCP1P25874 307 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 KIR2DL2P43627 348 aaPredicted RBP14.27□□□□□ -0.12
NUP50-202ENST00000396096 TAGLNQ01995 201 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms