RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SFTPA2Q8IWL1 248 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SFTPA1Q8IWL2 248 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MSRB3Q8IXL7 192 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM208Q9BTX3 173 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 PRSS23O95084 383 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SCGB1C2P0DMR2 95 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 COL9A1P20849 921 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 TIAL1Q01085 375 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 INSL4Q14641 139 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 KCNK15Q9H427 330 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MRM2Q9UI43 246 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF716A6NP11 495 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 PPYP01298 95 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 OR4A8P0C604 315 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 HTR1DP28221 377 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SLC25A42Q86VD7 318 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 TCTEX1D1Q8N7M0 179 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 Q8WTZ3 238 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 FLYWCH2Q96CP2 140 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 TECRQ9NZ01 308 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 YBX2Q9Y2T7 364 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 PCDHGA9Q9Y5G4 932 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF646O15015 1829 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 DUXBA0A1W2PPF3 345 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 KIR2DL1P43626 348 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM33P57088 247 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 B3GNTL1Q67FW5 361 aaPredicted RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 RFESDQ8TAC1 157 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 BLNKQ8WV28 456 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 PTX4Q96A99 478 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 NARFLQ9H6Q4 476 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MAP1LC3B2A6NCE7 125 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MAGEA5P43359 124 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ETFDHQ16134 617 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 SLC35E3Q7Z769 313 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 R3HDM4Q96D70 268 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 PLPPR2Q96GM1 343 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 TMEM204Q9BSN7 226 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MAP1LC3BQ9GZQ8 125 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 GEMIN2O14893 280 aaKnown RBP4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ADAM11O75078 769 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 OR3A1P47881 315 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 ID4P47928 161 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 MESTQ5EB52 335 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 LRP11Q86VZ4 500 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 OR8D4Q8NGM9 314 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 CHST5Q9GZS9 411 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 RNF122Q9H9V4 155 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 GPR27Q9NS67 375 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 CBY1Q9Y3M2 126 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 OR2W1Q9Y3N9 320 aa4.81□□□□□ -1.64
VPS13C-204ENST00000395898 A0A0U1RQV5 110 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 A0A1B0GU03 582 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CYR61O00622 381 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SYNGR2O43760 224 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 Q1RN00 199 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CLEC12BQ2HXU8 276 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CCDC144NLQ6NUI1 221 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 ZBTB44Q8NCP5 570 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 OR4C5Q8NGB2 326 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SEC11CQ9BY50 192 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SMDT1Q9H4I9 107 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 HEXA-AS1Q9H8Q6 139 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 PARD6AQ9NPB6 346 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SLC7A10Q9NS82 523 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 NTMQ9P121 344 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 KCNMB2Q9Y691 235 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 LTBP4Q8N2S1 1624 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 FANCMQ8IYD8 2048 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 RBFOX3A6NFN3 312 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 FAM74A7A6NL05 159 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 MPZL1O95297 269 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 LIFP15018 202 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 BCL3P20749 454 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TEPPQ6URK8 271 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 DOLPP1Q86YN1 238 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 MAP1LC3CQ9BXW4 147 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 PRNDQ9UKY0 176 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 ALPK2Q86TB3 2170 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TCRBV16S1A1N1A0A5B0 115 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 YBX1P67809 324 aaKnown RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 GABRA6Q16445 453 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 KHDC3LQ587J8 217 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 FBXW9Q5XUX1 488 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 DPPA3Q6W0C5 159 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 ZNF441Q8N8Z8 693 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 LILRB1Q8NHL6 650 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 OR10C1Q96KK4 312 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 NAT8Q9UHE5 227 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 VAX2Q9UIW0 290 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 AHCTF1Q8WYP5 2266 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 SEMA7AO75326 666 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 CELA2BP08218 269 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TSPAN7P41732 249 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 MMP16P51512 607 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 PMS2P11Q13670 270 aa4.8□□□□□ -1.64
VPS13C-204ENST00000395898 MYPOPQ86VE0 399 aaPredicted RBP4.8□□□□□ -1.64
VPS13C-204ENST00000395898 TUSC5Q8IXB3 177 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms