RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TFAP2AP05549 437 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 GABRB1P18505 474 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 FMO3P31513 532 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 POLR2IP36954 125 aaKnown RBP10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF616Q08AN1 781 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 LINC01590Q5TEZ4 76 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 ACSM6Q6P461 480 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 HEPN1Q6WQI6 88 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 OR2T33Q8NG76 320 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 OR6Q1Q8NGQ2 317 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 OR1N2Q8NGR9 330 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 RFKQ969G6 155 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 CREB3L1Q96BA8 519 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 DGCR14Q96DF8 476 aaKnown RBP10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 SNX22Q96L94 193 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 BCL7BQ9BQE9 202 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 GNB4Q9HAV0 340 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 BRD7Q9NPI1 651 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 RPL36Q9Y3U8 105 aaKnown RBP10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 A0A1W2PPI3 338 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 DPPA5A6NC42 116 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 PSMD9O00233 223 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 IFNGP01579 166 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 CEACAM3P40198 252 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 MNDAP41218 407 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 KIR3DL2P43630 455 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 POU3F4P49335 361 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 GNB1P62873 340 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 EFNB1P98172 346 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 PRAMEF5Q5TYX0 476 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 OR52W1Q6IF63 320 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 BATF2Q8N1L9 274 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 SLC37A3Q8NCC5 494 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 OR8B12Q8NGG6 310 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 OR52N4Q8NGI2 321 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 OR56B4Q8NH76 319 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 DLX4Q92988 240 aaPredicted RBP10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 MYCBPQ99417 103 aaPredicted RBP10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 TSSK6Q9BXA6 273 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 GON7Q9BXV9 100 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 ABCG5Q9H222 651 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 HIPK2Q9H2X6 1198 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 SEBOXQ9HB31 216 aaPredicted RBP10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 RETNQ9HD89 108 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 FKBP14Q9NWM8 211 aa10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.54□□□□□ -0.72
VCPKMT-201ENST00000395859 FAM172BPA6NC97 362 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 F8VVB4 439 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 F8VWA3 439 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 RGS10O43665 173 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 WBP4O75554 376 aaKnown RBP10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 HAAOP46952 286 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 EBI3Q14213 229 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 GINS1Q14691 196 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF573Q86YE8 665 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF491Q8N8L2 437 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 UBE2E2Q96LR5 201 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 MRPS18AQ9NVS2 196 aaKnown RBP10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 PSORS1C1Q9UIG5 152 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 POLDIP2Q9Y2S7 368 aa10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 UBE2J1Q9Y385 318 aaPredicted RBP10.53□□□□□ -0.72
VCPKMT-201ENST00000395859 PQLC2LA1A4F0 135 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 H3BSH0 61 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 IGLV3-1P01715 115 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 GYPBP06028 91 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 ZNF3P17036 446 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 TMEM11P17152 192 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 CDK2P24941 298 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 EPHA2P29317 976 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 ERP29P30040 261 aaKnown RBP10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 MAP2K3P46734 347 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 CRMP1Q14194 572 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 EDDM3AQ14507 147 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 TBCEQ15813 527 aaPredicted RBP10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 LCN1P1Q5VSP4 162 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 FAM53AQ6NSI3 398 aaPredicted RBP10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 LINC00322Q6ZN03 302 aaPredicted RBP10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 GPR141Q7Z602 305 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 TGIF2LXQ8IUE1 241 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 GID4Q8IVV7 300 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 SGPP2Q8IWX5 399 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 Q8N6K4 173 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 BPIFB6Q8NFQ5 453 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 OR8D4Q8NGM9 314 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 TMEM163Q8TC26 289 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 CORO2AQ92828 525 aa10.52□□□□□ -0.73
VCPKMT-201ENST00000395859 PRODHO43272 600 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 HSPA12AO43301 675 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 PSPNO60542 156 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 IGHA1P01876 353 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 CLUP10909 449 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 ATP6V1B1P15313 513 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 SPI1P17947 270 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 RAB40BQ12829 278 aa10.51□□□□□ -0.73
VCPKMT-201ENST00000395859 NXNL2Q5VZ03 156 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms