RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PRTN3P24158 256 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 FPR2P25090 351 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 FGF9P31371 208 aaPredicted RBP16.3■□□□□ 0.2
SNCA-203ENST00000394986 QRFPP83859 136 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 SCGB2A2Q13296 93 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 TRAPPC6BQ86SZ2 158 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 NR2C2APQ86WQ0 139 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 MRPS24Q96EL2 167 aaKnown RBP16.3■□□□□ 0.2
SNCA-203ENST00000394986 ZNF714Q96N38 554 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 IFT22Q9H7X7 185 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 LINC00312Q9Y6C7 94 aa16.3■□□□□ 0.2
SNCA-203ENST00000394986 ODAMA1E959 279 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 PDCD5O14737 125 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 BPNT1O95861 308 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 HCP5Q6MZN7 132 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 OR51D1Q8NGF3 324 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 NICN1Q9BSH3 213 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 UNKLQ9H9P5 680 aaKnown RBP16.29■□□□□ 0.2
SNCA-203ENST00000394986 KIF25Q9UIL4 384 aa16.29■□□□□ 0.2
SNCA-203ENST00000394986 C17orf98A8MV24 154 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 TMEM14DPA8MWL7 114 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 JUNBP17275 347 aaPredicted RBP16.28■□□□□ 0.2
SNCA-203ENST00000394986 RAB3BP20337 219 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
SNCA-203ENST00000394986 SIGIRRQ6IA17 410 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 C9orf139Q6ZV77 190 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 PIP4P2Q8N4L2 257 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 SIGLECL1Q8N7X8 197 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 NEK7Q8TDX7 302 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 YIPF6Q96EC8 236 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 CENPOQ9BU64 300 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 TMEM59Q9BXS4 323 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 RCC2Q9P258 522 aaKnown RBP16.28■□□□□ 0.2
SNCA-203ENST00000394986 MEIKINA0A087WXM9 373 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 A0A0B4J203 849 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 TRAV39A0A0B4J263 110 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 TCF21O43680 179 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 ARSBP15848 533 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 COX7A1P24310 79 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 RPS27AP62979 156 aaKnown RBP16.28■□□□□ 0.2
SNCA-203ENST00000394986 PLA2G7Q13093 441 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 DEFB112Q30KQ8 113 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 RAB12Q6IQ22 244 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 RTN4RL2Q86UN3 420 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 KCNG3Q8TAE7 436 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 ZNF418Q8TF45 676 aaPredicted RBP16.28■□□□□ 0.2
SNCA-203ENST00000394986 SUCNR1Q9BXA5 334 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 STEAP1Q9UHE8 339 aa16.28■□□□□ 0.2
SNCA-203ENST00000394986 TRGV10A0A0A0MS01 117 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 FUOMA2VDF0 154 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 MMP23AO75900 390 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 VENTXO95231 258 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 CLEC2LP0C7M8 214 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 TGFBR1P36897 503 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 GLP1RP43220 463 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 TUSC1Q2TAM9 212 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 NKAPLQ5M9Q1 402 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 PRAMEF5Q5TYX0 476 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 NCR3LG1Q68D85 454 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 OR13A1Q8NGR1 328 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 DYRK2Q92630 601 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 FAM3DQ96BQ1 224 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 KCTD7Q96MP8 289 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 BARHL1Q9BZE3 327 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 UBE2J1Q9Y385 318 aaPredicted RBP16.27■□□□□ 0.19
SNCA-203ENST00000394986 PEX16Q9Y5Y5 336 aa16.27■□□□□ 0.19
SNCA-203ENST00000394986 ATRQ13535 2644 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 A0A0A6YYD4 124 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 A0A0U1RQK1 487 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 hCG_1809904A0A1W2PP81 198 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 A0A1W2PPE2 198 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 A0A1W2PR64 198 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 A0A1W2PRV1 198 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 IFITM5A6NNB3 132 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 IGHV1-8P0DP01 117 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 SLC2A2P11168 524 aaPredicted RBP16.26■□□□□ 0.19
SNCA-203ENST00000394986 OMGP23515 440 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 SDC2P34741 201 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 PSMD7P51665 324 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 BAIAP2L2Q6UXY1 529 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 LPAR5Q9H1C0 372 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 ESM1Q9NQ30 184 aa16.26■□□□□ 0.19
SNCA-203ENST00000394986 UBE2QL1A1L167 161 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A10PA6NDY2 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A18PA6NE21 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A16PA6NEW6 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A20PA6NIJ5 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A8PA6NJQ4 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A7PA6NKC0 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A22PA8MWA6 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A12PA8MX19 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A5PA8MXJ8 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A23PA8MXZ1 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 NPFFO15130 113 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 CLPXO76031 633 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A15PP0C7V4 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A13PP0C7W8 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A14PP0C7W9 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 FAM90A24PP0C7X0 464 aa16.25■□□□□ 0.19
SNCA-203ENST00000394986 GDNFP39905 211 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms