RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 MRPS18CQ9Y3D5 142 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-208ENST00000394803 WSB1Q9Y6I7 421 aa8.67□□□□□ -1.02
UBE2D3-208ENST00000394803 NCOA6Q14686 2063 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-208ENST00000394803 VCANP13611 3396 aa8.67□□□□□ -1.02
UBE2D3-208ENST00000394803 LINC00587B1AMM8 73 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 LINC01387J3KSC0 135 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 TXNL1O43396 289 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 C1QL1O75973 258 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SCAF4O95104 1147 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 COX6A1P12074 109 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 MLF1P58340 268 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 TAS2R30P59541 319 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ID3Q02535 119 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ABLIM2Q6H8Q1 611 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SLC25A24Q6NUK1 477 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ZNF610Q8N9Z0 462 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SLAMF9Q96A28 289 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 C1QTNF5Q9BXJ0 243 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 GAR1Q9NY12 217 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 A0A1B0GU03 582 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 A0A1W2PPE3 182 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ZNF724A8MTY0 619 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ADAM20O43506 726 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 IFNA1P01562 189 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 WNT2P09544 360 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 DAOP14920 347 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 B4GALT1P15291 398 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 FGF12P61328 243 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 POLR2GP62487 172 aaKnown RBP eCLIP8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 ACSF3Q4G176 576 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 NMSQ5H8A3 153 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SPSB3Q6PJ21 355 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 H1FOOQ8IZA3 346 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 AKR7LQ8NHP1 331 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 MR1Q95460 341 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 TMEM45BQ96B21 275 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 RAB39BQ96DA2 213 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 CYYR1Q96J86 154 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SRXN1Q9BYN0 137 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 WNT5BQ9H1J7 359 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 SLC7A10Q9NS82 523 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
UBE2D3-208ENST00000394803 FAM221AA4D161 298 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 ZNF716A6NP11 495 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 HSD17B6O14756 317 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 GPR37O15354 613 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 SLC34A2O95436 690 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 COX5BP10606 129 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 DYNLT3P51808 116 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 ZNF92Q03936 586 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 ZNF674Q2M3X9 581 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 CEACAM16Q2WEN9 425 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 TCEAL6Q6IPX3 200 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 SLC25A26Q70HW3 274 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 DTX1Q86Y01 620 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 AGBL5Q8NDL9 886 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 OR2V1Q8NHB1 315 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 HIST1H2AAQ96QV6 131 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 P2RX4Q99571 388 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 PROK2Q9HC23 129 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 GPR35Q9HC97 309 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 ATP23Q9Y6H3 246 aa8.65□□□□□ -1.02
UBE2D3-208ENST00000394803 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 TUSC2O75896 110 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 CNOT4O95628 575 aaKnown RBP8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 NAPSAO96009 420 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 IGHV2-70P01814 119 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 FOLR3P41439 243 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 GLIPR1P48060 266 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 NKX6-1P78426 367 aaPredicted RBP8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 HLA-DRB3P79483 266 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 DLK1P80370 383 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 LYSMD4Q5XG99 296 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 C1orf87Q8N0U7 546 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 OR2Y1Q8NGV0 311 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 NEK7Q8TDX7 302 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 DYRK2Q92630 601 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 RARRES2Q99969 163 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 WNT16Q9UBV4 365 aa8.65□□□□□ -1.03
UBE2D3-208ENST00000394803 TRBV6-6A0A0A6YYG2 114 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 TRAV20A0A0B4J274 112 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ZNF587BE7ETH6 402 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 PPIHO43447 177 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 IGFBP4P22692 258 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 DUSP3P51452 185 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ICAM4Q14773 271 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 FAM209BQ5JX69 171 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ZDHHC23Q8IYP9 409 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 CLDND2Q8NHS1 167 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 PSMG3Q9BT73 122 aaPredicted RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 GGACTQ9BVM4 153 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 CISD1Q9NZ45 108 aaKnown RBP8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 LIPGQ9Y5X9 500 aa8.64□□□□□ -1.03
UBE2D3-208ENST00000394803 MYO7BQ6PIF6 2116 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms