RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 RPL7L1Q6DKI1 246 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 EIF5AL1Q6IS14 154 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 IGFL2Q6UWQ7 119 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 FBXW12Q6X9E4 464 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 SAT2Q96F10 170 aaPredicted RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 OR51I2Q9H344 312 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 RHOFQ9HBH0 211 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 OR2S2Q9NQN1 319 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 ASF1BQ9NVP2 202 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 LPAR3Q9UBY5 353 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 NSG2Q9Y328 171 aa13.1□□□□□ -0.31
UBE2D3-207ENST00000394801 NKX2-8O15522 239 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 DIRAS3O95661 229 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 SCTP09683 121 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 DUSP1P28562 367 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 HFEQ30201 348 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 MED12LQ86YW9 2145 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 SVBPQ8N300 66 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 IFT22Q9H7X7 185 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TAF9BQ9HBM6 251 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 ASCL3Q9NQ33 180 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 CLCF1Q9UBD9 225 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 LSM5Q9Y4Y9 91 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 C3orf85A0A1B0GTC6 90 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TMEM218A2RU14 115 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TRDCB7Z8K6 153 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 JTBO76095 146 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 SRPXP78539 464 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 HERPUD1Q15011 391 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TBC1D28Q2M2D7 210 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TMEM268Q5VZI3 342 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 OR2T2Q6IF00 324 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 SMIM8Q96KF7 97 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TP53RKQ96S44 253 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 TSNAXQ99598 290 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 MLXQ9UH92 298 aa13.09□□□□□ -0.31
UBE2D3-207ENST00000394801 ARID1AO14497 2285 aa13.08□□□□□ -0.31
UBE2D3-207ENST00000394801 PHF1O43189 567 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 TMEM33P57088 247 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 MST1LQ2TV78 715 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 FAM58AQ8N1B3 248 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 SUMF2Q8NBJ7 301 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 ARL11Q969Q4 196 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 TMEM222Q9H0R3 208 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 CA6P23280 308 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 PMP22Q01453 160 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 TGFBR3Q03167 851 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 GUSBP1Q15486 140 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 GPR157Q5UAW9 335 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF880Q6PDB4 577 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 P4HA3Q7Z4N8 544 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 DEFB124Q8NES8 71 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 FDCSPQ8NFU4 85 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 TMEM56Q96MV1 263 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 MMP26Q9NRE1 261 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 TMEM56-RWDD3S4R434 201 aa13.08□□□□□ -0.32
UBE2D3-207ENST00000394801 OTOGLQ3ZCN5 2332 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 TRAV24A0A0B4J272 114 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 IGKV1-6A0A0C4DH72 117 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 J3QT63 122 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 GLI4P10075 376 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 IGHV1-2P23083 117 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 S100A12P80511 92 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 VASH2Q86V25 355 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 UBAC2Q8NBM4 344 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 MRPL30Q8TCC3 161 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF488Q96MN9 340 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 ZNF705EA8MWA4 302 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 GPR31O00270 319 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 CDS2O95674 445 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 SCGB1D2O95969 90 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 SULT1A2P50226 295 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 CCL11P51671 97 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 MRPL49Q13405 166 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 PCSK4Q6UW60 755 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 IL34Q6ZMJ4 242 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 PUSL1Q8N0Z8 303 aaKnown RBP13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 SLC35G3Q8N808 338 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 OR52M1Q8NGK5 317 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 ARV1Q9H2C2 271 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 OR51B6Q9H340 312 aa13.07□□□□□ -0.32
UBE2D3-207ENST00000394801 ST8SIA3O43173 380 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 SMPD2O60906 423 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 CNOT4O95628 575 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 C10orf91Q5T1B1 145 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 FAM214BQ7L5A3 538 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 TBC1D26Q86UD7 250 aa13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 MYPOPQ86VE0 399 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 BOLLQ8N9W6 283 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-207ENST00000394801 NEK7Q8TDX7 302 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms