RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ATXN7O15265 892 aaPredicted RBP11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 SYNGR1O43759 233 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 TSPAN15O95858 294 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 SNRNP70P08621 437 aaKnown RBP11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 CBR1P16152 277 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 PLA2G5P39877 138 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 LHX2P50458 406 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 CCL20P78556 96 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 RTL6Q6ICC9 239 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 C20orf204Q6ZNR8 217 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF818PQ6ZRF7 136 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 C17orf78Q8N4C9 275 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 UBAC2Q8NBM4 344 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 UBALD1Q8TB05 177 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 B4GALT7Q9UBV7 327 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 NOSIPQ9Y314 301 aaKnown RBP11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 NSG2Q9Y328 171 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 MRPS18CQ9Y3D5 142 aaKnown RBP11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 IGKV1-6A0A0C4DH72 117 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 IGSF23A1L1A6 192 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 ARGFXA6NJG6 315 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 CDRT15L2A8MXV6 281 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 HSD17B6O14756 317 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 GPR37O15354 613 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 CYTIPO60759 359 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 GAPDHP04406 335 aaKnown RBP11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 FUT3P21217 361 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 SNCAP37840 140 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 HERV-K104P61576 105 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 PRDX4Q13162 271 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 PEA15Q15121 130 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 TBC1D26Q86UD7 250 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 TMEM251Q8N6I4 163 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 RARRES2Q99969 163 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF552Q9H707 407 aaPredicted RBP11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 SPACA1Q9HBV2 294 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 RPS10P5Q9NQ39 176 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 MTCH1Q9NZJ7 389 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF175Q9Y473 711 aa11.56□□□□□ -0.56
GTF2F1-201ENST00000394456 A0A1W2PPE3 182 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 TMEM50AO95807 157 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 PRH1P02810 166 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 CAMLGP49069 296 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 DVL1P1P54792 670 aaPredicted RBP11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 CLDN18P56856 261 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 SRSF6Q13247 344 aaKnown RBP11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 IQCF2Q8IXL9 164 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 GAPTQ8N292 157 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 EIF5A2Q9GZV4 153 aaKnown RBP11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 ZFHX2Q9C0A1 2572 aaPredicted RBP11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 C3orf85A0A1B0GTC6 90 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 MPPED1O15442 326 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 DANCRP0C864 163 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 EPHA1P21709 976 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 ECI1P42126 302 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 GUK1Q16774 197 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 AWAT1Q58HT5 328 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 EIF5AL1Q6IS14 154 aaKnown RBP11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 ODF3L1Q8IXM7 274 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 LGI3Q8N145 548 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 OR4D5Q8NGN0 318 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 LILRB1Q8NHL6 650 aaPredicted RBP11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 FAM213BQ8TBF2 198 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 TMEM171Q8WVE6 324 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 RSRP1Q9BUV0 290 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 BOD1L1Q8NFC6 3051 aa11.55□□□□□ -0.56
GTF2F1-201ENST00000394456 NUDT19A8MXV4 375 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 SSSCA1O60232 199 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 GPR137BO60478 399 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 MRPL33O75394 65 aaKnown RBP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 CST7O76096 145 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 ARG1P05089 322 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 GLAP06280 429 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 MEOX1P50221 254 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 EWSR1Q01844 656 aaKnown RBP eCLIP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 HABP2Q14520 560 aaPredicted RBP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 LYPD6BQ8NI32 183 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 C1QTNF5Q9BXJ0 243 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 CCL28Q9NRJ3 127 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 KLF2Q9Y5W3 355 aaPredicted RBP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF98A6NK75 572 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 A6NLC8 198 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 ST8SIA3O43173 380 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 ADAM20O43506 726 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 GLP1RP43220 463 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 HOXA4Q00056 320 aaPredicted RBP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 AVPI1Q5T686 147 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 SHEQ5VZ18 495 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 NEK7Q8TDX7 302 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 SUCNR1Q9BXA5 334 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 GLRX2Q9NS18 164 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 C19orf12Q9NSK7 152 aa11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF724A8MTY0 619 aa11.53□□□□□ -0.56
GTF2F1-201ENST00000394456 ZNF732B4DXR9 585 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms