RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CCL24O00175 119 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
CHMP3-202ENST00000393773 GLP1RP43220 463 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 GYS2P54840 703 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 HES1Q14469 280 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 CDK5R1Q15078 307 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 OR10H4Q8NGA5 316 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 OR5D18Q8NGL1 313 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
CHMP3-202ENST00000393773 SPACA5Q96QH8 159 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 ASCL2Q99929 193 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 KRT84Q9NSB2 600 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 CALYQ9NYX4 217 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 OR6C3Q9NZP0 311 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 SORL1Q92673 2214 aa12.07□□□□□ -0.48
CHMP3-202ENST00000393773 IGKV1D-33P01593 117 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 IGKV1-33P01594 117 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 ZNF20P17024 532 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 HTR1FP30939 366 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 ZNF85Q03923 595 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 MADCAM1Q13477 382 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 TP53I3Q53FA7 332 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 CASC10Q5T4H9 136 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 C9orf66Q5T8R8 295 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 LCNL1Q6ZST4 164 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 SPATA24Q86W54 205 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 FOXRED2Q8IWF2 684 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 OR8H3Q8N146 312 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 OR51T1Q8NGJ9 327 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 OR5M8Q8NGP6 311 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 OR13A1Q8NGR1 328 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 THTPAQ9BU02 230 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 DCLRE1BQ9H816 532 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 LINC00574Q9H8X3 128 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 RHOFQ9HBH0 211 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 SCOCQ9UIL1 159 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 GNG8Q9UK08 70 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 PSG11Q9UQ72 335 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 HYDINQ4G0P3 5121 aa12.06□□□□□ -0.48
CHMP3-202ENST00000393773 IL1AP01583 271 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 MT-ND2P03891 347 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 GPR12P47775 334 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 RAB7AP51149 207 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 SCN1BQ07699 218 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 FHL3Q13643 280 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 EBI3Q14213 229 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 FLOT2Q14254 428 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 HNF4GQ14541 408 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 KLHL22Q53GT1 634 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 FAM220AQ7Z4H9 259 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 SAXO1Q8IYX7 474 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 Q8N6K4 173 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 RNF152Q8N8N0 203 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 OR51A4Q8NGJ6 313 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 OR2G2Q8NGZ5 317 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 OR10AC1Q8NH08 325 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 MUC7Q8TAX7 377 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 FGGYQ96C11 551 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 OSBPL10Q9BXB5 764 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 IDI2-AS1Q9NZ38 188 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 KIF25Q9UIL4 384 aa12.05□□□□□ -0.48
CHMP3-202ENST00000393773 NPIPB11E5RHQ5 1161 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 AP4M1O00189 453 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 HSD17B6O14756 317 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 FAM107AO95990 144 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 ISG15P05161 165 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 CHATP28329 748 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 ECI1P42126 302 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
CHMP3-202ENST00000393773 GNG10P50151 68 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 NANOS3P60323 173 aaKnown RBP12.04□□□□□ -0.48
CHMP3-202ENST00000393773 ZP1P60852 638 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 CFHR3Q02985 330 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 KDM4DQ6B0I6 523 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 OR13C9Q8NGT0 318 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 FRRS1LQ9P0K9 344 aa12.04□□□□□ -0.48
CHMP3-202ENST00000393773 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 HSPB6O14558 160 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 SSTR5P35346 364 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 PAX5Q02548 391 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 ZNF816Q0VGE8 651 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-202ENST00000393773 BNIP1Q12981 228 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 FOXE3Q13461 319 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 RSBN1Q5VWQ0 802 aaPredicted RBP12.03□□□□□ -0.48
CHMP3-202ENST00000393773 FDX2Q6P4F2 183 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 HRASLS5Q96KN8 279 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 GABARAPL1Q9H0R8 117 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 ABCG5Q9H222 651 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 NEK6Q9HC98 313 aa12.03□□□□□ -0.48
CHMP3-202ENST00000393773 LIN7CQ9NUP9 197 aaKnown RBP12.03□□□□□ -0.48
CHMP3-202ENST00000393773 MYRFQ9Y2G1 1151 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms