RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 NEK7Q8TDX7 302 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 ZNF488Q96MN9 340 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 PRRX2Q99811 253 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 PLEKHA2Q9HB19 425 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 DLL3Q9NYJ7 618 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 C3orf85A0A1B0GTC6 90 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 GPR31O00270 319 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 DEGS1O15121 323 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 RPL12P30050 165 aaKnown RBP12.17□□□□□ -0.46
MKS1-203ENST00000393120 MDH2P40926 338 aaKnown RBP12.17□□□□□ -0.46
MKS1-203ENST00000393120 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
MKS1-203ENST00000393120 TUSC1Q2TAM9 212 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 SHEQ5VZ18 495 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 WDR86Q86TI4 376 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 C17orf78Q8N4C9 275 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 CNEP1R1Q8N9A8 125 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 OR4A4PQ8NGN8 299 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 SLC25A40Q8TBP6 338 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 TMEM56Q96MV1 263 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 TMEM222Q9H0R3 208 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 PIGMQ9H3S5 423 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 OBP2BQ9NPH6 170 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 TMEM56-RWDD3S4R434 201 aa12.17□□□□□ -0.46
MKS1-203ENST00000393120 IGKV1-6A0A0C4DH72 117 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 TMEM210A6NLX4 147 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 E5RGE8 158 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 K7EPK0 472 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 PHF1O43189 567 aaPredicted RBP12.16□□□□□ -0.46
MKS1-203ENST00000393120 MBPP02686 304 aaPredicted RBP12.16□□□□□ -0.46
MKS1-203ENST00000393120 GAPDHP04406 335 aaKnown RBP12.16□□□□□ -0.46
MKS1-203ENST00000393120 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
MKS1-203ENST00000393120 EIF5AL1Q6IS14 154 aaKnown RBP12.16□□□□□ -0.46
MKS1-203ENST00000393120 PCSK4Q6UW60 755 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 FAM71E2Q8N5Q1 922 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 ZNF565Q8N9K5 539 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 SCCPDHQ8NBX0 429 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 OR1J1Q8NGS3 322 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 NRIP2Q9BQI9 281 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 NSG2Q9Y328 171 aa12.16□□□□□ -0.46
MKS1-203ENST00000393120 A0A1W2PR80 420 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 NUDT19A8MXV4 375 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 NPIPB11E5RHQ5 1161 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 HS3ST1O14792 307 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 BET1O15155 118 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 FAM157CP0CG43 387 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 PGA5P0DJD9 388 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 HOXC12P31275 282 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 PSG7Q13046 419 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 P2RY6Q15077 328 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 VWA1Q6PCB0 445 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 UQCC3Q6UW78 93 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 C20orf204Q6ZNR8 217 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 GAPTQ8N292 157 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 PRSS33Q8NF86 280 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 TAAR6Q96RI8 345 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 CABLES2Q9BTV7 478 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 TAS2R3Q9NYW6 316 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 DKK4Q9UBT3 224 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 MED12LQ86YW9 2145 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 DUXBA0A1W2PPF3 345 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 RAB19A4D1S5 217 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 HSPB6O14558 160 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 CDS2O95674 445 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 CGAP01215 116 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 ERVS71-1P61550 626 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 ZNF146Q15072 292 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 MOB1BQ7L9L4 216 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 TBC1D26Q86UD7 250 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 C1orf174Q8IYL3 243 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 STPG2Q8N412 459 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 FAM169BQ8N8A8 192 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 SUN5Q8TC36 379 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 KLF14Q8TD94 323 aaPredicted RBP12.15□□□□□ -0.46
MKS1-203ENST00000393120 RDH5Q92781 318 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 MARC2Q969Z3 335 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 CCDC120Q96HB5 630 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 ADAT1Q9BUB4 502 aaKnown RBP12.15□□□□□ -0.46
MKS1-203ENST00000393120 GLS2Q9UI32 602 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 AMDHD2Q9Y303 409 aa12.15□□□□□ -0.46
MKS1-203ENST00000393120 B8ZZF3 427 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 LGALS8O00214 317 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 TNFSF13O75888 250 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 JTBO76095 146 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 IGLV1-44P01699 117 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 NBL1P41271 181 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 HLA-DRB3P79483 266 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 FOXF2Q12947 444 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 ZNF154Q13106 437 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 SPIN3Q5JUX0 258 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 GPR157Q5UAW9 335 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 ZNF324BQ6AW86 544 aaPredicted RBP12.14□□□□□ -0.47
MKS1-203ENST00000393120 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 LSM5Q9Y4Y9 91 aaKnown RBP12.14□□□□□ -0.47
MKS1-203ENST00000393120 PTPRBP23467 1997 aa12.14□□□□□ -0.47
MKS1-203ENST00000393120 MBD3L4A6NDZ8 208 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 MBD3L3A6NE82 208 aaPredicted RBP12.13□□□□□ -0.47
MKS1-203ENST00000393120 MBD3L5A6NJ08 208 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms