RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 A0A0B4J203 849 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 RNF223E7ERA6 249 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 ENSAO43768 121 aaKnown RBP10.95□□□□□ -0.66
USP44-202ENST00000393091 CLPXO76031 633 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 CD34P28906 385 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 C11orf42Q8N5U0 333 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 C18orf12Q96KH6 178 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 NKX3-1Q99801 234 aaPredicted RBP10.95□□□□□ -0.66
USP44-202ENST00000393091 KCNK15Q9H427 330 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 A0A1B0GW55 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 MCRIP1C9JLW8 97 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 SOCS1O15524 211 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 MT-ND4P03905 459 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L2P0CJ85 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L3P0CJ86 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L4P0CJ87 422 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L5P0CJ88 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L6P0CJ89 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L7P0CJ90 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 MMP9P14780 707 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 GNB2P62879 340 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 SSBP1Q04837 148 aaKnown RBP10.95□□□□□ -0.66
USP44-202ENST00000393091 TAF9Q16594 264 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4L9Q6RFH8 374 aaPredicted RBP10.95□□□□□ -0.66
USP44-202ENST00000393091 PLPPR1Q8TBJ4 325 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 S100A16Q96FQ6 103 aaKnown RBP10.95□□□□□ -0.66
USP44-202ENST00000393091 OCSTAMPQ9BR26 566 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 SIRPDQ9H106 197 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 PTTG2Q9NZH5 202 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 DUX4Q9UBX2 424 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 ZNF107Q9UII5 783 aaPredicted RBP10.95□□□□□ -0.66
USP44-202ENST00000393091 PEX16Q9Y5Y5 336 aa10.95□□□□□ -0.66
USP44-202ENST00000393091 LOC105371242A0A075B767 164 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 PAHP00439 452 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 SEC61A1P61619 476 aaKnown RBP10.94□□□□□ -0.66
USP44-202ENST00000393091 HACD4Q5VWC8 232 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 TEX29Q8N6K0 151 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 ZNRF1Q8ND25 227 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 MRPL30Q8TCC3 161 aaKnown RBP10.94□□□□□ -0.66
USP44-202ENST00000393091 SCPEP1Q9HB40 452 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 OR6C3Q9NZP0 311 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 PCDHB10Q9UN67 800 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 A0A1W2PPH5 198 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 TMEM30CPA0ZSE6 113 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 ZNF729A6NN14 1252 aaPredicted RBP10.94□□□□□ -0.66
USP44-202ENST00000393091 CEBPDP49716 269 aaPredicted RBP10.94□□□□□ -0.66
USP44-202ENST00000393091 MRPS10P82664 201 aaKnown RBP10.94□□□□□ -0.66
USP44-202ENST00000393091 HMGN3Q15651 99 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 MOGAT2Q3SYC2 334 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 OR10K2Q6IF99 312 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 Q6ZTK2 550 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 RAB3CQ96E17 227 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 NEDD4LQ96PU5 975 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 ZNF581Q9P0T4 197 aa10.94□□□□□ -0.66
USP44-202ENST00000393091 C22orf46C9J442 243 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 F2RL2O00254 374 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 GSTZ1O43708 216 aaPredicted RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 EIF4EP06730 217 aaKnown RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 BLVRBP30043 206 aaPredicted RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 BPIFB3P59826 476 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 GRK1Q15835 563 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 PAN3Q58A45 887 aaKnown RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 BTN2A1Q7KYR7 527 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 BOLLQ8N9W6 283 aaKnown RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 C19orf18Q8NEA5 215 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 DEFB108BQ8NET1 73 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ELL3Q9HB65 397 aaPredicted RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 RAB9BQ9NP90 201 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 DIABLOQ9NR28 239 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 hADV38S2A0JD32 116 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 C15orf65H3BRN8 121 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ELK1P19419 428 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 RBMXP38159 391 aaKnown RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 CBX5P45973 191 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 GABRA2P47869 451 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 CNPY1Q3B7I2 92 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 TMEM200BQ69YZ2 307 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 AUNIPQ9H7T9 357 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ROS1P08922 2347 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ODAMA1E959 279 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ISPDA4D126 451 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 SIRPB1O00241 398 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ITGB1BP1O14713 200 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 OR7C1O76099 320 aaPredicted RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 VEGFCP49767 419 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 CARTPTQ16568 116 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 Q6ZPA2 131 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 C9orf139Q6ZV77 190 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 OR6Q1Q8NGQ2 317 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 OR14J1Q9UGF5 321 aa10.93□□□□□ -0.66
USP44-202ENST00000393091 ZNF469Q96JG9 3925 aaPredicted RBP10.93□□□□□ -0.66
USP44-202ENST00000393091 ZNF205O95201 554 aa10.92□□□□□ -0.66
USP44-202ENST00000393091 HLA-DQB1P01920 261 aa10.92□□□□□ -0.66
USP44-202ENST00000393091 ZNF44P15621 663 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms