RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 ZNF552Q9H707 407 aaPredicted RBP10.54□□□□□ -0.72
RFC5-201ENST00000392542 UBE2J1Q9Y385 318 aaPredicted RBP10.54□□□□□ -0.72
RFC5-201ENST00000392542 KIR2DS1A0A191URI9 304 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 C9JQL5 133 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 SYNGR1O43759 233 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 TUSC2O75896 110 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 TSPAN15O95858 294 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 IL32P24001 234 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 KIR2DS4P43632 304 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 MEOX1P50221 254 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 NHLH2Q02577 135 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 KIR2DS1Q14954 304 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 HERPUD1Q15011 391 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 TSC22D1Q15714 1073 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 C3AR1Q16581 482 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 SPIN3Q5JUX0 258 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 ZNF695Q8IW36 515 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 MCEMP1Q8IX19 187 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 COMMD1Q8N668 190 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 NEK7Q8TDX7 302 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 SPIN2AQ99865 258 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 SPIN2BQ9BPZ2 258 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 PARP12Q9H0J9 701 aaKnown RBP10.54□□□□□ -0.72
RFC5-201ENST00000392542 LUZP4Q9P127 313 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 FREM2Q5SZK8 3169 aa10.54□□□□□ -0.72
RFC5-201ENST00000392542 ZNF407Q9C0G0 2248 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 SLC22A20A6NK97 555 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 HEXAP06865 529 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 SP1P08047 785 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 CTXN2P0C2S0 81 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 CD59P13987 128 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 PRKACAP17612 351 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 MIDNQ504T8 468 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 ZNF818PQ6ZRF7 136 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 LINC00596Q86U02 117 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 SELENOHQ8IZQ5 122 aaKnown RBP10.53□□□□□ -0.72
RFC5-201ENST00000392542 GAPTQ8N292 157 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 OR5P3Q8WZ94 311 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 BOD1Q96IK1 185 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 PLK3Q9H4B4 646 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 KLF13Q9Y2Y9 288 aaPredicted RBP10.53□□□□□ -0.72
RFC5-201ENST00000392542 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 DNAJC13O75165 2243 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 IGKV1D-13A0A0B4J2D9 117 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 HSPB6O14558 160 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 NME2P1O60361 137 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 IGKV1-13P0DP09 117 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 NFYBP25208 207 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 SNCAP37840 140 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 NKX2-1P43699 371 aaPredicted RBP10.53□□□□□ -0.72
RFC5-201ENST00000392542 CAMLGP49069 296 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 EWSR1Q01844 656 aaKnown RBP eCLIP10.53□□□□□ -0.72
RFC5-201ENST00000392542 SPACA1Q9HBV2 294 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 CACFD1Q9UGQ2 172 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 STRAPQ9Y3F4 350 aaKnown RBP10.53□□□□□ -0.72
RFC5-201ENST00000392542 MPC1Q9Y5U8 109 aa10.53□□□□□ -0.72
RFC5-201ENST00000392542 IGKV1-6A0A0C4DH72 117 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 DUXBA0A1W2PPF3 345 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 NDUFA2O43678 99 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 MT-CO3P00414 261 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 APLNRP35414 380 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 WNT5AP41221 380 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 RAB5CP51148 216 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 UCP2P55851 309 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 ZNF616Q08AN1 781 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 OR2C3Q8N628 320 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 SUMF2Q8NBJ7 301 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 MDS2Q8NDY4 140 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 MRPL30Q8TCC3 161 aaKnown RBP10.52□□□□□ -0.73
RFC5-201ENST00000392542 GTF3AQ92664 365 aaKnown RBP10.52□□□□□ -0.73
RFC5-201ENST00000392542 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
RFC5-201ENST00000392542 C19orf12Q9NSK7 152 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 MLXQ9UH92 298 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 IL17BQ9UHF5 180 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 PRSS50Q9UI38 385 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 KPTNQ9Y664 436 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 MED13Q9UHV7 2174 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 COL6A3P12111 3177 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 FAM24AA6NFZ4 105 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 OR5B21A6NL26 309 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 SP9P0CG40 484 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 UCP1P25874 307 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 ZNF573Q86YE8 665 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 HSD17B11Q8NBQ5 300 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 OR1K1Q8NGR3 316 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 IP6K3Q96PC2 410 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 SH3BGRL3Q9H299 93 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 CCL28Q9NRJ3 127 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 LIPGQ9Y5X9 500 aa10.52□□□□□ -0.73
RFC5-201ENST00000392542 TRBV6-6A0A0A6YYG2 114 aa10.51□□□□□ -0.73
RFC5-201ENST00000392542 KLRC4-KLRK1H3BQV0 150 aa10.51□□□□□ -0.73
RFC5-201ENST00000392542 HSD17B6O14756 317 aa10.51□□□□□ -0.73
RFC5-201ENST00000392542 ADAM20O43506 726 aa10.51□□□□□ -0.73
RFC5-201ENST00000392542 LILRA1O75019 489 aa10.51□□□□□ -0.73
RFC5-201ENST00000392542 SLC34A2O95436 690 aa10.51□□□□□ -0.73
RFC5-201ENST00000392542 POLR2GP62487 172 aaKnown RBP eCLIP10.51□□□□□ -0.73
RFC5-201ENST00000392542 GNG3P63215 75 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms