RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 SLC25A22Q9H936 323 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 CLN8Q9UBY8 286 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 TRAV17A0A0B4J275 112 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 ZNF735P0CB33 412 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 DUSP2Q05923 314 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 RAB32Q13637 225 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 PRSS54Q6PEW0 395 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 OR2V1Q8NHB1 315 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 ABLIM3O94929 683 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 CA5BP1Q8WTZ4 195 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 SOD3P08294 240 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 EIF3IQ13347 325 aaKnown RBP13.13□□□□□ -0.31
CCDC50-201ENST00000392455 CA13Q8N1Q1 262 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 OR8B3Q8NGG8 313 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 TMEM101Q96IK0 257 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 OR8B2Q96RD0 313 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 BCL2L10Q9HD36 194 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 SFRP2Q96HF1 295 aa13.13□□□□□ -0.31
CCDC50-201ENST00000392455 TOGARAM1Q9Y4F4 1720 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 PRSS2P07478 247 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 LRRC75BQ2VPJ9 315 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 ALKBH6Q3KRA9 238 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 TEX37Q96LM6 180 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 IL19Q9UHD0 177 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 PLCH1Q4KWH8 1693 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 SHISA7A6NL88 538 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 CCR5P51681 352 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 CACNG7P62955 275 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 CYB5R2Q6BCY4 276 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 Q6ZSR9 355 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 TRILQ7L0X0 811 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 OR10V1Q8NGI7 309 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 FAM157BP0CG42 384 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 HMGA2P52926 109 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 SAMD13Q5VXD3 122 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 ERVFRD-1P60508 538 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 ELOVL1Q9BW60 279 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 MYOFQ9NZM1 2061 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 ONECUT2O95948 504 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 SNRPEP62304 92 aaKnown RBP13.12□□□□□ -0.31
CCDC50-201ENST00000392455 OR4P4Q8NGL7 312 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 OR4C3Q8NH37 302 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 MAP1LC3AQ9H492 121 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 NPBWR2P48146 333 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 NOVP48745 357 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 GUCD1Q96NT3 240 aa13.12□□□□□ -0.31
CCDC50-201ENST00000392455 CA11O75493 328 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 PRDX2P32119 198 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 DEFB109BQ30KR1 87 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 LAMTOR1Q6IAA8 161 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 DPH3Q96FX2 82 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 METTL26Q96S19 204 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 OR5AC2Q9NZP5 309 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 WNT16Q9UBV4 365 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 GLULP15104 373 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 NRIP2Q9BQI9 281 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 FGF5P12034 268 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 TIAL1Q01085 375 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 ZNF77Q15935 545 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 PYCR3Q53H96 274 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 RBM45Q8IUH3 476 aaKnown RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 SNX22Q96L94 193 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 KIR2DL4Q99706 377 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 SLC17A3O00476 420 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 ICOSLGO75144 302 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 MAVSQ7Z434 540 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 RBMY1A1P0DJD3 496 aaKnown RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 SFTPCP11686 197 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 TMEM78Q5T7P6 136 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 MS4A6EQ96DS6 147 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 ASB16Q96NS5 453 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
CCDC50-201ENST00000392455 FOXQ1Q9C009 403 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 PAM16Q9Y3D7 125 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 OVCH2Q7RTZ1 564 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 NKAIN4Q8IVV8 208 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 DAPP1Q9UN19 280 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 HEXA-AS1Q9H8Q6 139 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
CCDC50-201ENST00000392455 FAM221AA4D161 298 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TMEM250H0YL14 139 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 FCGR3BO75015 233 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
CCDC50-201ENST00000392455 RNF165Q6ZSG1 346 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 OR10AG1Q8NH19 301 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 A0A1B0GU03 582 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 FAM181BA6NEQ2 426 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TRDCB7Z8K6 153 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms