RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 TMEM33P57088 247 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 S100A12P80511 92 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 FOXF2Q12947 444 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 SNAI3Q3KNW1 292 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 ACSF3Q4G176 576 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 HIKESHIQ53FT3 197 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 PRR30Q53SZ7 412 aaPredicted RBP17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 FBXW9Q5XUX1 488 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 DHRS11Q6UWP2 260 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 FAM219AQ8IW50 185 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 CPEB3Q8NE35 698 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 SPTSSAQ969W0 71 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 MRPL24Q96A35 216 aaKnown RBP17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 GALNT14Q96FL9 552 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 C12orf57Q99622 126 aa17.08■□□□□ 0.32
CSNK1D-203ENST00000392334 RP1L1Q8IWN7 2480 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 MSTNO14793 375 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 SS18L1O75177 396 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 CRYABP02511 175 aaKnown RBP17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 MMP7P09237 267 aaPredicted RBP17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 CCL2P13500 99 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 CD80P33681 288 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 LY6DQ14210 128 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 FAM180AQ6UWF9 173 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 FAM214BQ7L5A3 538 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 FOXRED2Q8IWF2 684 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 PIGTQ969N2 578 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 SPSB1Q96BD6 273 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 CACFD1Q9UGQ2 172 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 STARD10Q9Y365 291 aa17.07■□□□□ 0.32
CSNK1D-203ENST00000392334 C9JQL5 133 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 E5RGE8 158 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 IL18BPO95998 194 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 CCNOP22674 350 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 CRYGSP22914 178 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 PCBD1P61457 104 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 VWA1Q6PCB0 445 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 RPRMLQ8N4K4 120 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 LRTM2Q8N967 370 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 METTL9Q9H1A3 318 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 FAM212BQ9NTI7 297 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 NSG2Q9Y328 171 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 RELNP78509 3460 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 SEC11BP0C7V7 166 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 OR5H8P0DN80 308 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 GABRR1P24046 479 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 B2MP61769 119 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 SWI5Q1ZZU3 235 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 ZGRF1Q86YA3 2104 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 OR2AE1Q8NHA4 323 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 SNRNP40Q96DI7 357 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 CMSS1Q9BQ75 279 aaKnown RBP17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 ELL3Q9HB65 397 aaPredicted RBP17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 NECAP2Q9NVZ3 263 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 KCNIP3Q9Y2W7 256 aa17.06■□□□□ 0.32
CSNK1D-203ENST00000392334 OR6C6A6NF89 314 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 AHRRA9YTQ3 701 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 TMEM187Q14656 261 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 TSC22D1Q15714 1073 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 ZNF324BQ6AW86 544 aaPredicted RBP17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 ASCL4Q6XD76 172 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 SFT2D1Q8WV19 159 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 NAA60Q9H7X0 242 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 IFT22Q9H7X7 185 aa17.05■□□□□ 0.32
CSNK1D-203ENST00000392334 A0A1W2PR80 420 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 LCATP04180 440 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 OR8U9P0C7N5 309 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 KIR2DL2P43627 348 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 MEOX2P50222 304 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 RNF212Q495C1 297 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 OR8U1Q8NH10 309 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 HDHD3Q9BSH5 251 aaPredicted RBP17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 SUCNR1Q9BXA5 334 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 LSM5Q9Y4Y9 91 aaKnown RBP17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 TMEM225BP0DP42 221 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 RAB5BP61020 215 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 GPR157Q5UAW9 335 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 SEM1Q6ZVN7 128 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 SGK3Q96BR1 496 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 GINS3Q9BRX5 216 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 GP6Q9HCN6 339 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 GLRX2Q9NS18 164 aa17.04■□□□□ 0.32
CSNK1D-203ENST00000392334 H7C1Q1 480 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 GPR137BO60478 399 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 LYZL6O75951 148 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 MBPP02686 304 aaPredicted RBP17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 DANCRP0C864 163 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 SNCAP37840 140 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 KCNJ3P48549 501 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 PIGPP57054 158 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 RAB1AP62820 205 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 NRN1LQ496H8 165 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 SCRT1Q9BWW7 348 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 LIME1Q9H400 295 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 TUBA4BQ9H853 241 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 GPR173Q9NS66 373 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 AK3Q9UIJ7 227 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 ARHGAP21Q5T5U3 1957 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 BORCS7-ASMTA0A0B4J1R7 106 aa17.03■□□□□ 0.32
CSNK1D-203ENST00000392334 AGPAT2O15120 278 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms