RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ELOVL6Q9H5J4 265 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 GEMIN7Q9H840 131 aaKnown RBP0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 LZTFL1Q9NQ48 299 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 C12orf4Q9NQ89 552 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 C8orf4Q9NR00 106 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 DIABLOQ9NR28 239 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 MED9Q9NWA0 146 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 MRPL22Q9NWU5 206 aaKnown RBP0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 DNAJC27Q9NZQ0 273 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 PEF1Q9UBV8 284 aaKnown RBP0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 TFR2Q9UP52 801 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 WASHC3Q9Y3C0 194 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 MRPS16Q9Y3D3 137 aaKnown RBP0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 AMMECR1Q9Y4X0 333 aaPredicted RBP0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 PHLDA3Q9Y5J5 127 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 SBNO1A3KN83 1393 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 MIA3Q5JRA6 1907 aa0.17□□□□□ -2.38
SNORD28B-201ENST00000390993 DENND4BO75064 1496 aaPredicted RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 WDR19Q8NEZ3 1342 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 NYNRINQ9P2P1 1898 aaKnown RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 RTTNQ86VV8 2226 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 SYNJ2BP-COX16A0A087WUM0 186 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 IGHV3-15A0A0B4J1V0 119 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 PGPA6NDG6 321 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 NCF1BA6NI72 391 aaPredicted RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 NCF1CA8MVU1 366 aaPredicted RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 C2orf74A8MZ97 194 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 GATCO43716 136 aaKnown RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 ALOX12BO75342 701 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 ZMPSTE24O75844 475 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 CD9P21926 228 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 PEBP1P30086 187 aaKnown RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 ARR3P36575 388 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 CD200P41217 278 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 GPR4P46093 362 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 HCCSP53701 268 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 CTBP2P56545 445 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 CLDN18P56856 261 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 SKP2Q13309 424 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 OR8G1Q15617 311 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 PSG3Q16557 428 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 Q499Y3 187 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 HSP90B2PQ58FF3 399 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 TIMM23BQ5SRD1 257 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 LGALS9CQ6DKI2 356 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 LAIR2Q6ISS4 152 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 AGTRAPQ6RW13 159 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 UNQ6190/PRO20217Q6UXQ8 127 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 Q6ZTI0 123 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 C10orf107Q8IVU9 208 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 TRAM1L1Q8N609 369 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 LINC00337Q8N6G1 96 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 ZNF283Q8N7M2 679 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 FAM184AQ8NB25 1140 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 LFNGQ8NES3 379 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 OR11G2Q8NGC1 345 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 OR51Q1Q8NH59 317 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 C16orf78Q8WTQ4 265 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 MAL2Q969L2 176 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 MGLLQ99685 303 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 FAAP24Q9BTP7 215 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 TAPBPLQ9BX59 468 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 SHCBP1LQ9BZQ2 653 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 MRPS30Q9NP92 439 aaKnown RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 ANXA10Q9UJ72 324 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 ANGPT4Q9Y264 503 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 LINC00588Q9Y4M8 146 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 KLF12Q9Y4X4 402 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 MINOS1-NBL1R4GNA1 71 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 LCTP09848 1927 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 MDN1Q9NU22 5596 aa0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 FN1P02751 2386 aaKnown RBP0.16□□□□□ -2.38
SNORD28B-201ENST00000390993 NCKAP5O14513 1909 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PLXNB3Q9ULL4 1909 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 IGHV3OR15-7A0A075B7D8 119 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 GRIFINA4D1Z8 144 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 OR2AG2A6NM03 316 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 M0R1B8 84 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 UBFD1O14562 309 aaKnown RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PRMT5O14744 637 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SCN2BO60939 215 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SOX14O95416 240 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 OXTP01178 125 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 CRYGDP07320 174 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF705DP0CH99 300 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF705BP0CI00 300 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PRKACAP17612 351 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 CD82P27701 267 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PYCR1P32322 319 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 GTF2H1P32780 548 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 GABRA3P34903 492 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 TAGLN2P37802 199 aaKnown RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 HSPA13P48723 471 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 MLF1P58340 268 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 SLC35B1P78383 322 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF90Q03938 601 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 IL18Q14116 193 aa0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 ZNF791Q3KP31 576 aaPredicted RBP0.15□□□□□ -2.39
SNORD28B-201ENST00000390993 PABPC1L2AQ5JQF8 200 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms