RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ACTL10Q5JWF8 245 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 NXNL2Q5VZ03 156 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF322Q6U7Q0 402 aaPredicted RBP0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 MARCH3Q86UD3 253 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 PDCL2Q8N4E4 241 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 FER1L6-AS1Q8NA97 138 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR8G5Q8NG78 346 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR52K1Q8NGK4 314 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 LMX1AQ8TE12 382 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CMBLQ96DG6 245 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR8B2Q96RD0 313 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 LINC01587Q99440 93 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 B9D2Q9BPU9 175 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 APOL4Q9BPW4 351 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR2D2Q9H210 308 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 TUBA4BQ9H853 241 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 TMEM106BQ9NUM4 274 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 MRPL16Q9NX20 251 aaKnown RBP0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 STMN3Q9NZ72 180 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 OR5V1Q9UGF6 321 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 ZNF337Q9Y3M9 751 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 CHTOPQ9Y3Y2 248 aaKnown RBP0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 U3KQK5 164 aa0.66□□□□□ -2.3
RNU6-440P-201ENST00000390882 PLXNB1O43157 2135 aa0.65□□□□□ -2.3
RNU6-440P-201ENST00000390882 CACNA1DQ01668 2161 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 SHANK3Q9BYB0 1731 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 IGHV1-45A0A0A0MS14 117 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 FAM183AA6NL82 134 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 H3BP45 60 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 KLRC4-KLRK1H3BQV0 150 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 I3L4J1 428 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 hCG_2039718K7EN88 272 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 UBDO15205 165 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 TCF21O43680 179 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 SH2D1AO60880 128 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 GUSBP08236 651 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 CCDC172P0C7W6 258 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 ZNF3P17036 446 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 CCNOP22674 350 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 S100A2P29034 98 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 RPA3P35244 121 aaPredicted RBP0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 PLTPP55058 493 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 ATP5J2P56134 94 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 RHOAP61586 193 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 TSPAN5P62079 268 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 VSNL1P62760 191 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 HBG1P69891 147 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 HBG2P69892 147 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 BAXQ07812 192 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 CEACAM21Q3KPI0 293 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 SPIN4Q56A73 249 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 C10orf91Q5T1B1 145 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 HBMQ6B0K9 141 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 LAMTOR1Q6IAA8 161 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 CLEC20AQ6ZU45 233 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 SSX6Q7RTT6 188 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 OLIG3Q7RTU3 272 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 RBM45Q8IUH3 476 aaKnown RBP0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 C10orf107Q8IVU9 208 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 MSRB3Q8IXL7 192 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 ZNF567Q8N184 647 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 SPICQ8N5J4 248 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 ACBD4Q8NC06 268 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR4K17Q8NGC6 315 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR10D4PQ8NGN7 298 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR4K13Q8NH42 304 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 OR2V1Q8NHB1 315 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 CACNG8Q8WXS5 425 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 GLT1D1Q96MS3 346 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 BIRC8Q96P09 236 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 SUCNR1Q9BXA5 334 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 BCL2L14Q9BZR8 327 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 LRRC19Q9H756 370 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 TMBIM4Q9HC24 238 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 RMND1Q9NWS8 449 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 POMPQ9Y244 141 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 LINC00588Q9Y4M8 146 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 USH1CQ9Y6N9 552 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 MYO5BQ9ULV0 1848 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 AK9Q5TCS8 1911 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 VWDEQ8N2E2 1590 aa0.65□□□□□ -2.31
RNU6-440P-201ENST00000390882 DNMT1P26358 1616 aaKnown RBP0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 TRPM3Q9HCF6 1732 aaPredicted RBP0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 TRAV8-2A0A0B4J237 113 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 A0A1B0GTI1 187 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 A0A1W2PRG6 482 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 RAB19A4D1S5 217 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 MGAT4DA6NG13 374 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 ARGFXA6NJG6 315 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 RNASEK-C17orf49H0YIS7 233 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 TMEM250H0YL14 139 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 TP53I11O14683 189 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 LECT2O14960 151 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 CRXO43186 299 aaPredicted RBP0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 EEF1E1O43324 174 aaKnown RBP0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 PDCD6O75340 191 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 CRTAPO75718 401 aaPredicted RBP0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 IGKV1-16P04430 117 aa0.64□□□□□ -2.31
RNU6-440P-201ENST00000390882 CD99P14209 185 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms