RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 OR1I1O60431 355 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ALOX12BO75342 701 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CLDN11O75508 207 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 EEDO75530 441 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CRCPO75575 148 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR7A10O76100 309 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CDK14O94921 469 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2F2O95006 317 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2A4O95047 310 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 DIRAS3O95661 229 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 IGLV1-51P01701 117 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TRBV12-3P01733 135 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 IGHV1-69P01742 117 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 FGGP02679 453 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CLPSP04118 112 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM58BPP0C7Q3 252 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 AREGP15514 252 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC25A16P16260 332 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GGT1P19440 569 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CD82P27701 267 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 PSMB8P28062 276 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 AKT2P31751 481 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 BMI1P35226 326 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 HPCAL1P37235 193 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 NDUFA8P51970 172 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 RAD23AP54725 363 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CDH6P55285 790 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GEMIN4P57678 1058 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 RHBDL3P58872 404 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 FXYD4P59646 89 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ANAPC15P60006 121 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ACTBP60709 375 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SSTP61278 116 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 FGF12P61328 243 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 HIST1H4AP62805 103 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ACTG1P63261 375 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 INCA1Q0VD86 236 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 PPP1R8Q12972 351 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ECH1Q13011 328 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MMDQ15546 238 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MAPK6Q16659 721 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 HADHQ16836 314 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CLEC12BQ2HXU8 276 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 HYAL4Q2M3T9 481 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CCDC40Q4G0X9 1142 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TP53I3Q53FA7 332 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 C1orf137Q5JT78 98 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 IBA57Q5T440 356 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 UBE2UQ5VVX9 321 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GLT8D1Q68CQ7 371 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GIMAP6Q6P9H5 292 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 RASL11AQ6T310 242 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM231DQ6ZW35 169 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MBOAT2Q6ZWT7 520 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MRPL55Q7Z7F7 128 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OOSP2Q86WS3 158 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 HORMAD1Q86X24 394 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SLC13A5Q86YT5 568 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 NUDCD3Q8IVD9 361 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 APRG1Q8IVJ8 170 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GABRG1Q8N1C3 465 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CBR4Q8N4T8 237 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CLDN19Q8N6F1 224 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 KRTCAP2Q8N6L1 136 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 INO80EQ8NBZ0 244 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 LEMD2Q8NC56 503 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ST6GALNAC3Q8NDV1 305 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR11H1Q8NG94 326 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR7G3Q8NG95 312 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR52R1Q8NGF1 315 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR8J1Q8NGP2 316 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 KIF18AQ8NI77 898 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 NANPQ8TBE9 248 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 DEPDC1BQ8WUY9 529 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ZNF75CPQ92670 426 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 GTF2H4Q92759 462 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TSR2Q969E8 191 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MAL2Q969L2 176 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MYLPFQ96A32 169 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 EFHD2Q96C19 240 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TMA16Q96EY4 203 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 NAP1L5Q96NT1 182 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2A7Q96R45 310 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 CLCC1Q96S66 551 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ATP6V0BQ99437 205 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 VAT1Q99536 393 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 COPS8Q99627 209 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SH3GL1Q99961 368 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TREX2Q9BQ50 279 aaPredicted RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 ACBD6Q9BR61 282 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 FAM213AQ9BRX8 229 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 UPK3BQ9BT76 320 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TSSK6Q9BXA6 273 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MRPS26Q9BYN8 205 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 TSGA10Q9BZW7 698 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SLIRPQ9GZT3 109 aaKnown RBP-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 SRRQ9GZT4 340 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MFFQ9GZY8 342 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 OR2AG1Q9H205 316 aa-0.73□□□□□ -2.53
TRAJ28-201ENST00000390509 MRM3Q9HC36 420 aaKnown RBP-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms