RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ATF1P18846 271 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 RPL19P84098 196 aaKnown RBP4.89□□□□□ -1.63
TRAV35-201ENST00000390462 FMODQ06828 376 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 PRDX1Q06830 199 aaKnown RBP4.89□□□□□ -1.63
TRAV35-201ENST00000390462 SMAGPQ0VAQ4 97 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 PON3Q15166 354 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 MARC1Q5VT66 337 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 UGT2A3Q6UWM9 527 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.89□□□□□ -1.63
TRAV35-201ENST00000390462 OR11H7Q8NGC8 314 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 IMP4Q96G21 291 aaKnown RBP4.89□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF184Q99676 751 aaPredicted RBP4.89□□□□□ -1.63
TRAV35-201ENST00000390462 ARHGDIGQ99819 225 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 HOPXQ9BPY8 73 aaPredicted RBP4.89□□□□□ -1.63
TRAV35-201ENST00000390462 EBF4Q9BQW3 602 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 EDA2RQ9HAV5 297 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 GLTPQ9NZD2 209 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 CTSZQ9UBR2 303 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 FLVCR1Q9Y5Y0 555 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 RFX7Q2KHR2 1363 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 DNAH14Q0VDD8 3507 aa4.89□□□□□ -1.63
TRAV35-201ENST00000390462 RIF1Q5UIP0 2472 aaKnown RBP4.88□□□□□ -1.63
TRAV35-201ENST00000390462 SIP14410 1827 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 PARP14Q460N5 1801 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 FOCADQ5VW36 1801 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TGIF2-C20orf24A0A0A6YYL0 155 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 FUOMA2VDF0 154 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 RBFOX3A6NFN3 312 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 CLDN24A6NM45 220 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 MYL12BO14950 172 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 KBTBD11O94819 623 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 VENTXO95231 258 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 SNRPAP09012 282 aaKnown RBP4.88□□□□□ -1.63
TRAV35-201ENST00000390462 IGHV3-43DP0DP04 118 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 CYBAP13498 195 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 MYL12AP19105 171 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 CXCR1P25024 350 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 P2RX1P51575 399 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TMEM33P57088 247 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 RAB4BP61018 213 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 INCA1Q0VD86 236 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 SKP2Q13309 424 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF235Q14590 738 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 HIST3H3Q16695 136 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 LRRC75BQ2VPJ9 315 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF876PQ49A33 203 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TMEM42Q69YG0 159 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TNFAIP8L2Q6P589 184 aaPredicted RBP4.88□□□□□ -1.63
TRAV35-201ENST00000390462 DHRS4L2Q6PKH6 230 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 C2orf66Q6UXQ4 117 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 COMMD7Q86VX2 200 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 KRTAP1-3Q8IUG1 177 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 CLDN22Q8N7P3 220 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 GPR26Q8NDV2 337 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 OR11L1Q8NGX0 322 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 SLC37A2Q8TED4 501 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 F2RL3Q96RI0 385 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 PHB2Q99623 299 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TMEM109Q9BVC6 243 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 PECRQ9BY49 303 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 Q9H3A6 140 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 FBXL15Q9H469 300 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 CACNG5Q9UF02 275 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF391Q9UJN7 358 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 FBXO5Q9UKT4 447 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.88□□□□□ -1.63
TRAV35-201ENST00000390462 COL4A6Q14031 1691 aa4.88□□□□□ -1.63
TRAV35-201ENST00000390462 TPRP12270 2363 aaKnown RBP4.87□□□□□ -1.63
TRAV35-201ENST00000390462 MCM3APO60318 1980 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 EPOPA6NHQ4 379 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 FAM72CH0Y354 149 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 MFNGO00587 321 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 LMX1BO60663 402 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 NPIPB7O75200 414 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF253O75346 499 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 REM1O75628 298 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 CD5P06127 495 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 COX7A1P24310 79 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 HTR1EP28566 365 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 TAS2R46P59540 309 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 PFN3P60673 137 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 PSME3P61289 254 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 HBG1P69891 147 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 HBG2P69892 147 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 REG3AQ06141 175 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 CD300CQ08708 224 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 ZNF718Q3SXZ3 478 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 PRR30Q53SZ7 412 aaPredicted RBP4.87□□□□□ -1.63
TRAV35-201ENST00000390462 CLEC12AQ5QGZ9 265 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 FAM72AQ5TYM5 149 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 FAM72DQ6L9T8 149 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 RFLNAQ6ZTI6 216 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 SLC51BQ86UW2 128 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 MYPOPQ86VE0 399 aaPredicted RBP4.87□□□□□ -1.63
TRAV35-201ENST00000390462 FAM72BQ86X60 149 aa4.87□□□□□ -1.63
TRAV35-201ENST00000390462 TMEM61Q8N0U2 210 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms