RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 RBM48Q5RL73 367 aaKnown RBP2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZNF660Q6AZW8 331 aaPredicted RBP2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZNF470Q6ECI4 717 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 LINC00304Q8N9R0 145 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 PDCD6IPQ8WUM4 868 aaKnown RBP2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 GABARAPL1Q9H0R8 117 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 ABCG5Q9H222 651 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 ASF1BQ9NVP2 202 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 GMEB1Q9Y692 573 aa2.87□□□□□ -1.95
RNU6-40P-201ENST00000384254 TRPC5OSA6NMA1 111 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 TCF21O43680 179 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 CYTH3O43739 400 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 CA2P00918 260 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 HLA-AP01891 365 aaKnown RBP2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 INAFM2P0DMQ5 153 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZNF35P13682 527 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 S100A2P29034 98 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 HSPA13P48723 471 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 PLTPP55058 493 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 RHOAP61586 193 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 FAM162BQ5T6X4 162 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 CRLF3Q8IUI8 442 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 SLC25A45Q8N413 288 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 CCDC12Q8WUD4 166 aaPredicted RBP2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 CLDN23Q96B33 292 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 URGCP-MRPS24S4R325 110 aa2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 POLR3AO14802 1390 aaPredicted RBP2.86□□□□□ -1.95
RNU6-40P-201ENST00000384254 BAZ1BQ9UIG0 1483 aaKnown RBP2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 IGHV1-45A0A0A0MS14 117 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZNF233A6NK53 670 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZNF729A6NN14 1252 aaPredicted RBP2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 IQCF5A8MTL0 148 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 F8VZ95 297 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 H3BQ85 93 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 IGHV3-53P01767 116 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 TRGV3P03979 118 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 CNTFRP26992 372 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 KDELR2P33947 212 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 RCVRNP35243 200 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZNF235Q14590 738 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 DEFB134Q4QY38 66 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 TMEM25Q86YD3 366 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 ZFP82Q8N141 532 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 BPIFB6Q8NFQ5 453 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 PYURFQ96I23 114 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 TRNT1Q96Q11 434 aaKnown RBP2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 BCL2L14Q9BZR8 327 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 SPACA1Q9HBV2 294 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 NAGKQ9UJ70 344 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 BTRCQ9Y297 605 aa2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 LRPPRCP42704 1394 aaKnown RBP2.85□□□□□ -1.95
RNU6-40P-201ENST00000384254 VGLL3A8MV65 326 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 EFCAB9A8MZ26 197 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 C15orf65H3BRN8 121 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 POP7O75817 140 aaKnown RBP2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 IGKV4-1P06312 121 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 LIMS3P0CW19 117 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 LIMS4P0CW20 117 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 CRABP2P29373 138 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 CD151P48509 253 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 IHHQ14623 411 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 BCL2A1Q16548 175 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 PDZD11Q5EBL8 140 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 LAIR2Q6ISS4 152 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 Q6ZQT7 251 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 RPRMLQ8N4K4 120 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 C3orf22Q8N5N4 141 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 FBXL15Q9H469 300 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 DMAC2Q9NW81 257 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 MS4A12Q9NXJ0 267 aa2.84□□□□□ -1.95
RNU6-40P-201ENST00000384254 SEC16AO15027 2179 aa2.84□□□□□ -1.96
RNU6-40P-201ENST00000384254 IGKV1OR2-108A0A075B7D4 117 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 IGKV3D-11A0A0A0MRZ8 115 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 A0A0B4J2C4 111 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 ARGFXA6NJG6 315 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 LIN7AO14910 233 aaPredicted RBP2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 GPR75O95800 540 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 GP1BAP07359 652 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 GUSBP08236 651 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 ZNF3P17036 446 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 PVALBP20472 110 aaPredicted RBP2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 CD34P28906 385 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 ACTR1BP42025 376 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 OR10A3P58181 314 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 RAB8AP61006 207 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 DMTNQ08495 405 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 PMS2P3Q13401 168 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 ZBTB6Q15916 424 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 AMMECR1LQ6DCA0 310 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 ELP2Q6IA86 826 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 ADM2Q7Z4H4 148 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 COMTD1Q86VU5 262 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 OR5AK3PQ8NH89 298 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 CMTM2Q8TAZ6 248 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 HBEGFQ99075 208 aa2.83□□□□□ -1.96
RNU6-40P-201ENST00000384254 TM2D3Q9BRN9 247 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms