RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 C9orf40Q8IXQ3 194 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 TMEM252Q8N6L7 170 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 SIGLECL1Q8N7X8 197 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 SLC46A1Q96NT5 459 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 IMMP2LQ96T52 175 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 RSG1Q9BU20 258 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 RBM24Q9BX46 236 aaKnown RBP13.09□□□□□ -0.31
VLDLR-202ENST00000382099 RNF208Q9H0X6 261 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 HIPK2Q9H2X6 1198 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 ST3GAL6Q9Y274 331 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 LHX8Q68G74 356 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 OR56B2PQ8NGI1 322 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 SLC35D1Q9NTN3 355 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 TRAV30A0A087WSZ9 112 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 A0A1W2PRS3 328 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 IFNA5P01569 189 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 ZNF823P16415 610 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 WASP42768 502 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 NHLH1Q02575 133 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 SHBQ15464 509 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 OR5D14Q8NGL3 314 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 PLEKHF2Q9H8W4 249 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 RPRMQ9NS64 109 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 IGKV1D-8A0A087WSZ0 117 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 NDUFS8O00217 210 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 PRKNO60260 465 aaPredicted RBP13.08□□□□□ -0.32
VLDLR-202ENST00000382099 PITX3O75364 302 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 IFNA1P01562 189 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 GLB1P16278 677 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 CCR2P41597 374 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 KCNG3Q8TAE7 436 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 HS3ST2Q9Y278 367 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 R4GMQ9 66 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 NUP210LQ5VU65 1888 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 HSPB2A8KAH6 182 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 SH2D1BO14796 132 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 POU2F2P09086 479 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 ZNF728P0DKX0 622 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 ADMP35318 185 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 HSPB2Q16082 182 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 FDX2Q6P4F2 183 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 ZNF440Q8IYI8 595 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 LMLNQ96KR4 655 aa13.08□□□□□ -0.32
VLDLR-202ENST00000382099 HDHD3Q9BSH5 251 aaPredicted RBP13.08□□□□□ -0.32
VLDLR-202ENST00000382099 SLC6A8P48029 635 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 PAFAH1B2P68402 229 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 NUS1Q96E22 293 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR10A2Q9H208 303 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 PLK3Q9H4B4 646 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 VSIRQ9H7M9 311 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 NAA60Q9H7X0 242 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 IL21Q9HBE4 155 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 GPR34Q9UPC5 381 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 CELSR3Q9NYQ7 3312 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 TMEM14DPA8MWL7 114 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 B4DGG1 531 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 ZNF737O75373 536 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 CT62P0C5K7 136 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 CRISP2P16562 243 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OPRM1P35372 400 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 QRFPP83859 136 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR10G4Q8NGN3 311 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 ADIPOR1Q96A54 375 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR1A2Q9Y585 309 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 NKX2-6A6NCS4 301 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 IGLC3P0DOY3 106 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 PMCHP20382 165 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 BLKP51451 505 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 ZIC1Q15915 447 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 ZNF468Q5VIY5 522 aaPredicted RBP13.07□□□□□ -0.32
VLDLR-202ENST00000382099 CYP2G1PQ6ZSU1 146 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 ZNF765Q7L2R6 523 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 NIT1Q86X76 327 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR11L1Q8NGX0 322 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR4F5Q8NH21 305 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 RHBDD1Q8TEB9 315 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 OR4F4Q96R69 305 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 GTF3C1Q12789 2109 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 ARHGAP21Q5T5U3 1957 aa13.07□□□□□ -0.32
VLDLR-202ENST00000382099 PLXNA2O75051 1894 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 GNG7O60262 68 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 YPEL1O60688 119 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 SAP30O75446 220 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 PPP1CBP62140 327 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 FOXK1P85037 733 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 YPEL2Q96QA6 119 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 SOHLH2Q9NX45 425 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 COA3Q9Y2R0 106 aaPredicted RBP13.06□□□□□ -0.32
VLDLR-202ENST00000382099 GYPAP02724 150 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 CTLA4P16410 223 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 GABRA2P47869 451 aa13.06□□□□□ -0.32
VLDLR-202ENST00000382099 UBE2NP61088 152 aaKnown RBP13.06□□□□□ -0.32
VLDLR-202ENST00000382099 PSG6Q00889 435 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms