RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CCDC121Q6ZUS5 278 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 CBR4Q8N4T8 237 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 PARP16Q8N5Y8 322 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 OR9G1Q8NH87 305 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 HAVCR2Q8TDQ0 301 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 TOMM40LQ969M1 308 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 RPEQ96AT9 228 aa13.76□□□□□ -0.21
HMGN1-204ENST00000380749 PPIL3Q9H2H8 161 aaKnown RBP13.76□□□□□ -0.21
HMGN1-204ENST00000380749 KBTBD11-OT1A0A1B0GTJ5 212 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 E9PQ18 207 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 H3BNX3 289 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 MAGEB3O15480 346 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 ZFPL1O95159 310 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 CLIC3O95833 236 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 GBX2P52951 348 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-204ENST00000380749 SLC35A2P78381 396 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 RAB40BQ12829 278 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 CDK5R1Q15078 307 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 C17orf58Q2M2W7 97 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 C9orf152Q5JTZ5 239 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 ZNF565Q8N9K5 539 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 PXT1Q8NFP0 134 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 OR51T1Q8NGJ9 327 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 MYDGFQ969H8 173 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 KIRREL1Q96J84 757 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 GPER1Q99527 375 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 ISG20L2Q9H9L3 353 aaKnown RBP13.75□□□□□ -0.21
HMGN1-204ENST00000380749 AASSQ9UDR5 926 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 MOB4Q9Y3A3 225 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 HSPE1-MOB4S4R3N1 261 aa13.75□□□□□ -0.21
HMGN1-204ENST00000380749 MEIKINA0A087WXM9 373 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 FAM106CPP0CH98 169 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 RAB3AP20336 220 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 C21orf33P30042 268 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-204ENST00000380749 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 FOXB2Q5VYV0 432 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 ELP2Q6IA86 826 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 WFDC9Q8NEX5 89 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
HMGN1-204ENST00000380749 PDCD1LG2Q9BQ51 273 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 FAM192AQ9GZU8 254 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 ERVK13-1Q9NX77 482 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 CALYQ9NYX4 217 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 KIF25Q9UIL4 384 aa13.74□□□□□ -0.21
HMGN1-204ENST00000380749 LY6LH3BQJ8 138 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 IL1AP01583 271 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 CD2P06729 351 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 IGLL1P15814 213 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 GABRB1P18505 474 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 KCNJ3P48549 501 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 ZSCAN26Q16670 478 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 C10orf67Q8IYJ2 551 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 TNFAIP8L1Q8WVP5 186 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 C9orf16Q9BUW7 83 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 BARHL1Q9BZE3 327 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 NCOR1P1Q9H4R4 102 aa13.73□□□□□ -0.21
HMGN1-204ENST00000380749 SH2D7A6NKC9 451 aaPredicted RBP13.72□□□□□ -0.21
HMGN1-204ENST00000380749 GABRPO00591 440 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 AMY1AP04745 511 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 AMY2AP04746 511 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 MADCAM1Q13477 382 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 RSU1Q15404 277 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 TCTEX1D4Q5JR98 221 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 SATL1Q86VE3 508 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 OR13A1Q8NGR1 328 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 OR56B4Q8NH76 319 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 CNIH3Q8TBE1 160 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 RCC1LQ96I51 464 aaKnown RBP13.72□□□□□ -0.21
HMGN1-204ENST00000380749 AMBNQ9NP70 447 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 IDI2-AS1Q9NZ38 188 aa13.72□□□□□ -0.21
HMGN1-204ENST00000380749 RPL36Q9Y3U8 105 aaKnown RBP13.72□□□□□ -0.21
HMGN1-204ENST00000380749 TRAV24A0A0B4J272 114 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 PSMB11A5LHX3 300 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 E9PI62 339 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 J3QR06 171 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 DUS4LO95620 317 aaKnown RBP13.71□□□□□ -0.21
HMGN1-204ENST00000380749 PAX5Q02548 391 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 THNSL2Q86YJ6 484 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 OSR2Q8N2R0 312 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 OR52I1Q8NGK6 324 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 RHOXF1Q8NHV9 184 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
HMGN1-204ENST00000380749 SNRNP70P08621 437 aaKnown RBP13.71□□□□□ -0.22
HMGN1-204ENST00000380749 SOX2P48431 317 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 RAB7AP51149 207 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 HES1Q14469 280 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 LTC4SQ16873 150 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 PIGYQ3MUY2 71 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 KLHL22Q53GT1 634 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 RSBN1Q5VWQ0 802 aaPredicted RBP13.71□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF529Q6P280 563 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 OR8H3Q8N146 312 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 OR51A2Q8NGJ7 313 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 MRGPRDQ8TDS7 321 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF649Q9BS31 505 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 LINC00574Q9H8X3 128 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 TAS2R4Q9NYW5 299 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 ZNF281Q9Y2X9 895 aa13.71□□□□□ -0.22
HMGN1-204ENST00000380749 LOC100130705A0A1B0GUX0 176 aa13.7□□□□□ -0.22
HMGN1-204ENST00000380749 A0A1W2PPI3 338 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms