RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 OSR2Q8N2R0 312 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 PNKDQ8N490 385 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.56□□□□□ -1.2
HMGN1-202ENST00000380747 ZDHHC22Q8N966 263 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 CHST4Q8NCG5 386 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 DUX5Q96PT3 197 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 YTHDF1Q9BYJ9 559 aaKnown RBP7.56□□□□□ -1.2
HMGN1-202ENST00000380747 SLITRK2Q9H156 845 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 ESM1Q9NQ30 184 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 PCDHB16Q9NRJ7 776 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 ST3GAL6Q9Y274 331 aa7.56□□□□□ -1.2
HMGN1-202ENST00000380747 A0A0U1RQK1 487 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 A0A1W2PP11 408 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 DNAJC9-AS1A6NH13 148 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 RRP9O43818 475 aaKnown RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 MRPS14O60783 128 aaKnown RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 ZNF780AO75290 641 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 UCHL1P09936 223 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 PSMA1P25786 263 aaKnown RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 LMO1P25800 156 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 GP2P55259 537 aaKnown RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 UBA52P62987 128 aaKnown RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 EMX1Q04741 257 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 AESQ08117 197 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 GPR176Q14439 515 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 IL13RA2Q14627 380 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 ATXN7L3Q14CW9 347 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 KRBOX4Q5JUW0 171 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 AWAT2Q6E213 333 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 ZNF782Q6ZMW2 699 aaPredicted RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 TMEM91Q6ZNR0 172 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 CDH26Q8IXH8 852 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 SPARTQ8N0X7 666 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 NKAIN3Q8N8D7 197 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 OR4D6Q8NGJ1 314 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 OR51T1Q8NGJ9 327 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 PHYHIPQ92561 330 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 TNFRSF14Q92956 283 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 ZNF714Q96N38 554 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 PPIL3Q9H2H8 161 aaKnown RBP7.55□□□□□ -1.2
HMGN1-202ENST00000380747 TNFRSF19Q9NS68 423 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 IL36GQ9NZH8 169 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 FAM96BQ9Y3D0 163 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 LRRC42Q9Y546 428 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 VWFP04275 2813 aa7.55□□□□□ -1.2
HMGN1-202ENST00000380747 TRGV10A0A0A0MS01 117 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 TRAV24A0A0B4J272 114 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 FUOMA2VDF0 154 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 GEMIN2O14893 280 aaKnown RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 CRTAPO75718 401 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 OR7C1O76099 320 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 ZNF728P0DKX0 622 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 GTF2F2P13984 249 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 SRMP19623 302 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 PSMB9P28065 219 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 ERP29P30040 261 aaKnown RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 GABRA5P31644 462 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 GLIPR1P48060 266 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 UBE2E1P51965 193 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 DLX6P56179 175 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 RBM11P57052 281 aaKnown RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 ACTG1P63261 375 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 FABP5Q01469 135 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 SLC9A3R2Q15599 337 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 SSX1Q16384 188 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 ATAD3CQ5T2N8 411 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 GLT8D1Q68CQ7 371 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 HCP5Q6MZN7 132 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 ZNF773Q6PK81 442 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 METAP1DQ6UB28 335 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 TCF23Q7RTU1 214 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 LRRTM1Q86UE6 522 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 C11orf42Q8N5U0 333 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 Q8NFD4 153 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 FOXRED1Q96CU9 486 aaPredicted RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 COQ2Q96H96 371 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 UQCC2Q9BRT2 126 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 BANF2Q9H503 90 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 HEXA-AS1Q9H8Q6 139 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 UNKLQ9H9P5 680 aaKnown RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 ZNF581Q9P0T4 197 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 SF3B6Q9Y3B4 125 aaKnown RBP7.54□□□□□ -1.2
HMGN1-202ENST00000380747 LINC00312Q9Y6C7 94 aa7.54□□□□□ -1.2
HMGN1-202ENST00000380747 WNK2Q9Y3S1 2297 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 ODAMA1E959 279 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 MEIOCA2RUB1 952 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 C17orf98A8MV24 154 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 HOXA3O43365 443 aaPredicted RBP7.53□□□□□ -1.2
HMGN1-202ENST00000380747 SC5DO75845 299 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 ARL6IP5O75915 188 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 PAHP00439 452 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 CSN2P05814 226 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 MELTFP08582 738 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 FBP1P09467 338 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 IGHV1-8P0DP01 117 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 MGMTP16455 207 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 CALRP27797 417 aaKnown RBP7.53□□□□□ -1.2
HMGN1-202ENST00000380747 ADMP35318 185 aa7.53□□□□□ -1.2
HMGN1-202ENST00000380747 SAA4P35542 130 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms