RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CLEC18AA5D8T8 446 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 CRTAPO75718 401 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 IGKV1D-12P01611 117 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 IGKV3-15P01624 115 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 APOC1P02654 83 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 DBHP09172 617 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 TPT1P13693 172 aaKnown RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 TUBG1P23258 451 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 SNU13P55769 128 aaKnown RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF101Q8IZC7 436 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 ZNF610Q8N9Z0 462 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 CLEC18CQ8NCF0 446 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 OR5T2Q8NGG2 359 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 CASTOR1Q8WTX7 329 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 SAT2Q96F10 170 aaPredicted RBP6.59□□□□□ -1.35
CDKL5-202ENST00000379996 C18orf12Q96KH6 178 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 SEC11CQ9BY50 192 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 OR2H1Q9GZK4 316 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 TUBG2Q9NRH3 451 aa6.59□□□□□ -1.35
CDKL5-202ENST00000379996 C9JQL5 133 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 GOSR1O95249 250 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 CTSDP07339 412 aaPredicted RBP6.59□□□□□ -1.36
CDKL5-202ENST00000379996 FAHP16930 419 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 HOXB4P17483 251 aaPredicted RBP6.59□□□□□ -1.36
CDKL5-202ENST00000379996 PI3P19957 117 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 CHATP28329 748 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 LPAR6P43657 344 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 ATXN7L3Q14CW9 347 aaPredicted RBP6.59□□□□□ -1.36
CDKL5-202ENST00000379996 KCTD9Q7L273 389 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 SKA3Q8IX90 412 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 RNF141Q8WVD5 230 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 RBM24Q9BX46 236 aaKnown RBP6.59□□□□□ -1.36
CDKL5-202ENST00000379996 EGLN1Q9GZT9 426 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 TLNRD1Q9H1K6 362 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 C12orf4Q9NQ89 552 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 TAS2R3Q9NYW6 316 aa6.59□□□□□ -1.36
CDKL5-202ENST00000379996 RCC2Q9P258 522 aaKnown RBP6.59□□□□□ -1.36
CDKL5-202ENST00000379996 MGAQ8IWI9 3026 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 ZNHIT1O43257 154 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 APOC3P02656 99 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 GAPDHP04406 335 aaKnown RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 CBR1P16152 277 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 SULT1A2P50226 295 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 TFF3Q07654 80 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 SLC9A3R2Q15599 337 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 FAM189A2Q15884 450 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 COLCA1Q6ZS62 124 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 BHLHA15Q7RTS1 189 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 GCNT2Q8N0V5 402 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 WDR31Q8NA23 367 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 OR5H2Q8NGV7 314 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 SPSB4Q96A44 273 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 GALNT14Q96FL9 552 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 HDHD3Q9BSH5 251 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 SEC61A2Q9H9S3 476 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 ZNF391Q9UJN7 358 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 PKD1L2Q7Z442 2459 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 TRGV8A0A0C4DH27 118 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 OR5H1A6NKK0 313 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 F5H0A9 414 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 ZNF14P17017 642 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 TLE1Q04724 770 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 TMEM187Q14656 261 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 FAM219AQ8IW50 185 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 CNEP1R1Q8N9A8 125 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 INO80EQ8NBZ0 244 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 NRIP2Q9BQI9 281 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 URM1Q9BTM9 101 aaKnown RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 WNT5BQ9H1J7 359 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 OPN3Q9H1Y3 402 aaPredicted RBP6.58□□□□□ -1.36
CDKL5-202ENST00000379996 SLC25A15Q9Y619 301 aa6.58□□□□□ -1.36
CDKL5-202ENST00000379996 hCG_38984A0A1B0GV85 526 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 SDCBPO00560 298 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 CCL21O00585 134 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 NUPL2O15504 423 aaKnown RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 GLAP06280 429 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 HCKP08631 526 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 MUC1P15941 1255 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 RCC1P18754 421 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 DTYMKP23919 212 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 KCNJ3P48549 501 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 CAV2P51636 162 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 PJVKQ0ZLH3 352 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 OR8B8Q15620 311 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 Q6ZS49 121 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 C6orf201Q7Z4U5 140 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 TMEM200AQ86VY9 491 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 CXorf67Q86X51 503 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 OR51T1Q8NGJ9 327 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 MAFIPQ8WZ33 124 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 RNASE6Q93091 150 aaKnown RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 PSMG3-AS1Q96PY0 264 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 ADAT1Q9BUB4 502 aaKnown RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 FGF23Q9GZV9 251 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 NDRG3Q9UGV2 375 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 C22orf46C9J442 243 aa6.57□□□□□ -1.36
CDKL5-202ENST00000379996 F8W735 103 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-202ENST00000379996 B4GALT1P15291 398 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms