RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GPR75O95800 540 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TYMSP04818 313 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 HMGN2P05204 90 aaKnown RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SLC35E2P0CK97 266 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 GLB1P16278 677 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF136P52737 540 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CLDN2P57739 230 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TPPP2P59282 170 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SUMO1P63165 101 aaKnown RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 GLYATL3Q5SZD4 288 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 VN1R4Q7Z5H5 301 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM144Q7Z5S9 345 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 MRGPRGQ86SM5 289 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ADGRE4PQ86SQ3 457 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CISD2Q8N5K1 135 aaKnown RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF676Q8N7Q3 588 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 NUP43Q8NFH3 380 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 OR6K6Q8NGW6 343 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ASB10Q8WXI3 467 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 NKD1Q969G9 470 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SLAMF6Q96DU3 332 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TP53TG3Q9ULZ0 132 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 A0A0A6YYH2 397 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 A6NJ64 397 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 ABHD16AO95870 558 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 HRASP01112 189 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 IGHV4-34P06331 123 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 CTSEP14091 401 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 ATP6V0CP27449 155 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 GABRA3P34903 492 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 MPLP40238 635 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 WASP42768 502 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 ASCL1P50553 236 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 MFSD12Q6NUT3 480 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 CENPVQ7Z7K6 275 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 RTN4RL2Q86UN3 420 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 SFTPA1Q8IWL2 248 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 OR52R1Q8NGF1 315 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 ZPLD1Q8TCW7 415 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 RBMXL1Q96E39 390 aaKnown RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 SPACA9Q96E40 222 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 TNFRSF13CQ96RJ3 184 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 CGGBP1Q9UFW8 167 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 PLAGL1Q9UM63 463 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 HIF3AQ9Y2N7 669 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 NSG2Q9Y328 171 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 XRCC2O43543 280 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 SCGB1A1P11684 91 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 CPMP14384 443 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 CCKBRP32239 447 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 GRK6P43250 576 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 RAB9AP51151 201 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 RPL15P61313 204 aaKnown RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 PAFAH1B2P68402 229 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 DMWDQ09019 674 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 FHL1Q13642 323 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 PSG3Q16557 428 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 AMMECR1LQ6DCA0 310 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 RCBTB1Q8NDN9 531 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 TSTD1Q8NFU3 115 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 NUDT16L1Q9BRJ7 211 aaKnown RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 LMF2Q9BU23 707 aaKnown RBP6.5□□□□□ -1.37
CDKL5-201ENST00000379989 SERTAD3Q9UJW9 196 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 GTF3C1Q12789 2109 aa6.5□□□□□ -1.37
CDKL5-201ENST00000379989 IGHV2-26A0A0B4J1V2 119 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 NPIPA5A0A0B4J1W7 369 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 A0A1W2PNV4 684 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FEZF1A0PJY2 475 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 OR2T8A6NH00 312 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 C2CD4DB7Z1M9 353 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 TAX1BP3O14907 124 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 LYPD3O95274 346 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 ADIRFQ15847 76 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FCRL6Q6DN72 434 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FAM71F2Q6NXP2 309 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 LRRC69Q6ZNQ3 347 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FAM220AQ7Z4H9 259 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FNDC9Q8TBE3 224 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 TSEN15Q8WW01 171 aaKnown RBP6.49□□□□□ -1.37
CDKL5-201ENST00000379989 STARD4Q96DR4 205 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 CNRIP1Q96F85 164 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-201ENST00000379989 BTF3L4Q96K17 158 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 UHRF2Q96PU4 802 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 OR5B12Q96R08 314 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 OR7D2Q96RA2 312 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF586Q9NXT0 402 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FBXL7Q9UJT9 491 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 PILRBQ9UKJ0 227 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FAM230AA0A1W2PPH8 454 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 H7BYZ3 331 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 RAMP3O60896 148 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 TNFSF15O95150 251 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 SERPINA7P05543 415 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 TACSTD2P09758 323 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 GFRA1P56159 465 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 SRPXP78539 464 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 HTD2P86397 168 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 SQSTM1Q13501 440 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms