RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TGIF2LXQ8IUE1 241 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 PUSL1Q8N0Z8 303 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SLC35G3Q8N808 338 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF596Q8TC21 504 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 GLYATL2Q8WU03 294 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 EDARADDQ8WWZ3 215 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 MRPL24Q96A35 216 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 RGCCQ9H4X1 137 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 NRIP3Q9NQ35 241 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 INPP5EQ9NRR6 644 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 RNF114Q9Y508 228 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 TP53BP1Q12888 1972 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SCN8AQ9UQD0 1980 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 COL4A4P53420 1690 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 COL4A6Q14031 1691 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 MFSD2BA6NFX1 497 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 E9PQ18 207 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 H7C417 338 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 M0QYG6 137 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 DNPH1O43598 174 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 NGFP01138 241 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 LIPFP07098 398 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 BDKRB2P30411 391 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 SUB1P53999 127 aaKnown RBP eCLIP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 RHOBP62745 196 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 GUCA2AQ02747 115 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF85Q03923 595 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CDK5R1Q15078 307 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 TAF9Q16594 264 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PLPPR5Q32ZL2 321 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 RNASE10Q5GAN6 216 aaKnown RBP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 DRAM2Q6UX65 266 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CDH26Q8IXH8 852 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 LINC01356Q8N9X3 169 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 YIPF5Q969M3 257 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PELI1Q96FA3 418 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 SCMH1Q96GD3 660 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ADGRL4Q9HBW9 690 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 THYN1Q9P016 225 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ANAPC1Q9H1A4 1944 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 LIPT2A6NK58 231 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF705GA8MUZ8 300 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PMS2P2O95744 297 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 UBBP0CG47 229 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 UBCP0CG48 685 aaKnown RBP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ERGP11308 486 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 SRMP19623 302 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 TIMP3P35625 211 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 REG1BP48304 166 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 LOXL3P58215 753 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 TESK1Q15569 626 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF529Q6P280 563 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 RPL22L1Q6P5R6 122 aaKnown RBP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 DCUN1D4Q92564 292 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 WDYHV1Q96HA8 205 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 BPESC1Q9GZL8 116 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PRSS22Q9GZN4 317 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 IL19Q9UHD0 177 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 SLC22A13Q9Y226 551 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 KLF2Q9Y5W3 355 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ATRQ13535 2644 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 AQP7P3A6NL99 342 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 A8MXE2 369 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 NDUFA2O43678 99 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 RAMP1O60894 148 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 OR2T7P0C7T2 308 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A6P0DMU7 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A5P0DMU8 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A7P0DMV0 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A8P0DMV1 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A9P0DMV2 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 S100PP25815 95 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 GABRA4P48169 554 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 MSMO1Q15800 293 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A2Q5DJT8 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A1Q5HYN5 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CCDC71LQ8N9Z2 235 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 ACBD4Q8NC06 268 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 OR51S1Q8NGJ8 323 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CT45A3Q8NHU0 189 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 GRAMD2BQ96HH9 432 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 GSN-AS1Q9NRJ2 163 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 MRPS18AQ9NVS2 196 aaKnown RBP5.67□□□□□ -1.5
NEDD9-202ENST00000379446 NPTNQ9Y639 398 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 IGHV3-72A0A0B4J1Y9 119 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 OR5H8P0DN80 308 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 CD34P28906 385 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 GAS1P54826 345 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PLAURQ03405 335 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 UBE2NLQ5JXB2 153 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 OR14K1Q8NGZ2 314 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 OR5R1Q8NH85 324 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 SCGB1C1Q8TD33 95 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 C15orf40Q8WUR7 153 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 HPSE2Q8WWQ2 592 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 TMEM106AQ96A25 262 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 SMIM19Q96E16 107 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PRSS27Q9BQR3 290 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 FLRT3Q9NZU0 649 aa5.67□□□□□ -1.5
NEDD9-202ENST00000379446 PURGQ9UJV8 347 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms