RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RGCCQ9H4X1 137 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 GPN1Q9HCN4 374 aaPredicted RBP9.35□□□□□ -0.91
NEDD9-201ENST00000379433 KIAA1549Q9HCM3 1950 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 TNRC6AQ8NDV7 1962 aaKnown RBP9.35□□□□□ -0.91
NEDD9-201ENST00000379433 EEF1E1-BLOC1S5C9J1V9 151 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 FBXO24O75426 580 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 RAB6AP20340 208 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 TMEM50BP56557 158 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 MRPS10P82664 201 aaKnown RBP9.35□□□□□ -0.91
NEDD9-201ENST00000379433 GAGE1Q13065 139 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 ST6GALNAC3Q8NDV1 305 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 CSNK2A3Q8NEV1 391 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 KCNG3Q8TAE7 436 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 ELMOD3Q96FG2 381 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 PRO1933Q9H354 126 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 SPRR3Q9UBC9 169 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 SCP2D1Q9UJQ7 156 aa9.35□□□□□ -0.91
NEDD9-201ENST00000379433 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 KLK10O43240 276 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 SYNGR3O43761 229 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 OR7C1O76099 320 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 NRASP01111 189 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 SERPINA5P05154 406 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 DLX5P56178 289 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF585AQ6P3V2 769 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 GLDNQ6ZMI3 551 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ERASQ7Z444 233 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 DLL4Q9NR61 685 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 TAS2R8Q9NYW2 309 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 CRIM1Q9NZV1 1036 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 FZR1Q9UM11 496 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 C7orf66A4D0T2 115 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 SLC22A20A6NK97 555 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 MELTFP08582 738 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 IDH3GP51553 393 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 GPM6AP51674 278 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 FXYD4P59646 89 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 RIPPLY1Q0D2K3 151 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 RAB35Q15286 201 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF260Q3ZCT1 412 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 LAMTOR1Q6IAA8 161 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ATRAIDQ6UW56 229 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 SLC25A26Q70HW3 274 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ADAD2Q8NCV1 583 aaKnown RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 OR5M8Q8NGP6 311 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 TOMM40LQ969M1 308 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 URM1Q9BTM9 101 aaKnown RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 CST11Q9H112 138 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 MOB1AQ9H8S9 216 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ACKR4Q9NPB9 350 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 LOC102725191A0A1B0GVB3 256 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 RGS11O94810 467 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 RRASP10301 218 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 GABRA1P14867 456 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 H2BFSP57053 126 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 SORDQ00796 357 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 TCF15Q12870 199 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ECH1Q13011 328 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 CD276Q5ZPR3 534 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 C15orf40Q8WUR7 153 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 ZNF488Q96MN9 340 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 GGACTQ9BVM4 153 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 LPAR2Q9HBW0 351 aa9.34□□□□□ -0.91
NEDD9-201ENST00000379433 RBM7Q9Y580 266 aaKnown RBP9.34□□□□□ -0.91
NEDD9-201ENST00000379433 IGKV1-27A0A075B6S5 117 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 NAP1L6A6NFF2 107 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 FAM74A1Q5RGS3 127 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 HAGHLQ6PII5 290 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-201ENST00000379433 UNQ6494/PRO21346Q6UXR6 183 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 FBXL14Q8N1E6 418 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 C1orf162Q8NEQ5 155 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-201ENST00000379433 OR6K3Q8NGY3 331 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 FAM210BQ96KR6 192 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 HYLS1Q96M11 299 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 EHFQ9NZC4 300 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 GEMIN2O14893 280 aaKnown RBP9.33□□□□□ -0.92
NEDD9-201ENST00000379433 AGFG2O95081 481 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 CELA3BP08861 270 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF708P17019 499 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 NPBWR2P48146 333 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF616Q08AN1 781 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 MICBQ29980 383 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 LEMD1Q68G75 181 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 ABLIM2Q6H8Q1 611 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 MRPL21Q7Z2W9 205 aaKnown RBP9.33□□□□□ -0.92
NEDD9-201ENST00000379433 ZNF546Q86UE3 836 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 CCDC54Q8NEL0 328 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 OR51F2Q8NH61 342 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 IL36RNQ9UBH0 155 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 MED13LQ71F56 2210 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 CA11O75493 328 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 SFTPBP07988 381 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 TRAPPC2P0DI81 140 aa9.33□□□□□ -0.92
NEDD9-201ENST00000379433 TRAPPC2BP0DI82 140 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms