RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 MMP27Q9H306 513 aa20.27■□□□□ 0.83
TM6SF1-204ENST00000379390 LPAR2Q9HBW0 351 aa20.27■□□□□ 0.83
TM6SF1-204ENST00000379390 GNB3P16520 340 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 EDDM3BP56851 147 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 LCN2P80188 198 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 AESQ08117 197 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 OR4M1Q8NGD0 313 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 OR5D13Q8NGL4 314 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 COQ2Q96H96 371 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 CMTM3Q96MX0 182 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 DIABLOQ9NR28 239 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 KCNK7Q9Y2U2 307 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 A3GALT2U3KPV4 340 aa20.26■□□□□ 0.83
TM6SF1-204ENST00000379390 MEX3AA1L020 520 aaKnown RBP20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 H3BUI4 141 aa20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 MGST3O14880 152 aa20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 SMAD7O15105 426 aaKnown RBP20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 SCGNO76038 276 aa20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 HIST1H1DP16402 221 aaKnown RBP20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 ZFP36P26651 326 aaKnown RBP20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 NPY4RP50391 375 aa20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 HSF4Q9ULV5 492 aa20.25■□□□□ 0.83
TM6SF1-204ENST00000379390 TRAV18A0A075B6X5 111 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 KIAA1324LA8MWY0 1029 aaPredicted RBP20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 CSN2P05814 226 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 RBM39Q14498 530 aaKnown RBP20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 TMEM69Q5SWH9 247 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 ETAA1Q9NY74 926 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 ELF5Q9UKW6 265 aaPredicted RBP20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 MFNGO00587 321 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 CLPXO76031 633 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 GLIPR1P48060 266 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 KRBOX4Q5JUW0 171 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 CNIH2Q6PI25 160 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 BTN2A1Q7KYR7 527 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 PTTG2Q9NZH5 202 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 EXTL2Q9UBQ6 330 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 ADAM30Q9UKF2 790 aa20.24■□□□□ 0.83
TM6SF1-204ENST00000379390 TLN2Q9Y4G6 2542 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 A0A0A6YYH2 397 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 TMEM235A6NFC5 223 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 A6NJ64 397 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 C22orf46C9J442 243 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 XRCC3O43542 346 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 TMEM249Q2WGJ8 235 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 CDNFQ49AH0 187 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 RSBN1Q5VWQ0 802 aaPredicted RBP20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 HDHD3Q9BSH5 251 aaPredicted RBP20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 C19orf12Q9NSK7 152 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 AK3Q9UIJ7 227 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 KIF25Q9UIL4 384 aa20.23■□□□□ 0.83
TM6SF1-204ENST00000379390 A8MXK9 166 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 GLAP06280 429 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 PTHLHP12272 177 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 TNFSF8P32971 234 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 KCNJ3P48549 501 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 P2RX3P56373 397 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 DIRAS2Q96HU8 199 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 NUDT16L1Q9BRJ7 211 aaKnown RBP20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 CSPG4Q6UVK1 2322 aa20.22■□□□□ 0.83
TM6SF1-204ENST00000379390 FOXH1O75593 365 aa20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 S100A5P33763 92 aa20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 TAS2R20P59543 309 aa20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 RPL31P62899 125 aaKnown RBP20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 ZNF260Q3ZCT1 412 aa20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 ZNF497Q6ZNH5 498 aa20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 DCTN5Q9BTE1 182 aa20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 RPUSD1Q9UJJ7 312 aaKnown RBP20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 MRPS7Q9Y2R9 242 aaKnown RBP20.21■□□□□ 0.83
TM6SF1-204ENST00000379390 LOC105371242A0A075B767 164 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 GPR37O15354 613 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 TALDO1P37837 337 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 GCDHQ92947 438 aaPredicted RBP20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 WDFY2Q96P53 400 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 MEIKINA0A087WXM9 373 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 TRAV39A0A0B4J263 110 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 IGHV4-31P0DP07 118 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 FAM185AQ8N0U4 392 aa20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.2■□□□□ 0.82
TM6SF1-204ENST00000379390 MAST4O15021 2626 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 A0A1W2PQ09 198 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 TMEM30CPA0ZSE6 113 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 ODAMA1E959 279 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 SERPINE3A8MV23 424 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 MSMBP08118 114 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 GSTP1P09211 210 aaKnown RBP20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 ERP29P30040 261 aaKnown RBP20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 ARFRP1Q13795 201 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 SLC35E4Q6ICL7 350 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 TCF23Q7RTU1 214 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 OR6Q1Q8NGQ2 317 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 OR4K15Q8NH41 348 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 CCDC107Q8WV48 283 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 NUDCD2Q8WVJ2 157 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 MSI2Q96DH6 328 aaKnown RBP20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 COX4I2Q96KJ9 171 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 CMSS1Q9BQ75 279 aaKnown RBP20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 AUNIPQ9H7T9 357 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 MMP26Q9NRE1 261 aa20.19■□□□□ 0.82
TM6SF1-204ENST00000379390 B4DSR2 109 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms