RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 ZNF561Q8N587 486 aa20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 CD177Q8N6Q3 437 aa20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 ASCC1Q8N9N2 400 aaKnown RBP20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 MRPL30Q8TCC3 161 aaKnown RBP20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 SNX22Q96L94 193 aa20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 DNTTIP1Q9H147 329 aa20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 Q9N2K0 584 aa20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 DLL4Q9NR61 685 aa20.58■□□□□ 0.89
ECHDC3-201ENST00000379215 PPIAL4EA0A075B759 164 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 A0A1B0GVG6 124 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 A0A1W2PPR1 153 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 TMEM30CPA0ZSE6 113 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 CLEC18AA5D8T8 446 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 PPIAL4DF5H284 164 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 PSPNO60542 156 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 NDUFB6O95139 128 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 PMP2P02689 132 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 PPIAL4FP0DN26 164 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 GABRA2P47869 451 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 GRK1Q15835 563 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 SLC35E4Q6ICL7 350 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 CLEC18BQ6UXF7 455 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 C20orf204Q6ZNR8 217 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 CLEC18CQ8NCF0 446 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 SDSLQ96GA7 329 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 NUDT15Q9NV35 164 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 NECAP2Q9NVZ3 263 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 PPIAL4AQ9Y536 164 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 ROS1P08922 2347 aa20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 CHD3Q12873 2000 aaKnown RBP20.57■□□□□ 0.88
ECHDC3-201ENST00000379215 IGHV3OR15-7A0A075B7D8 119 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 NKX6-3A6NJ46 265 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 FSTL3O95633 263 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 ZNF735P0CB33 412 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 BTG1P62324 171 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 ZNF880Q6PDB4 577 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 IDO2Q6ZQW0 420 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 OR5T2Q8NGG2 359 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 MAFIPQ8WZ33 124 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 UPRTQ96BW1 309 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 C20orf85Q9H1P6 137 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 ZNF665Q9H7R5 613 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 LAMP3Q9UQV4 416 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 UBR5O95071 2799 aaPredicted RBP20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 ICE1Q9Y2F5 2266 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 INMT-MINDY4F8WBC2 141 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 J3QKU1 62 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 ZNF737O75373 536 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 PLA2G2AP14555 144 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 OR3A1P47881 315 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 HOXA4Q00056 320 aaPredicted RBP20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 ATXN7L3Q14CW9 347 aaPredicted RBP20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 C17orf107Q6ZR85 190 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 OVCH2Q7RTZ1 564 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 OR5D13Q8NGL4 314 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 GINS4Q9BRT9 223 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 FAM234AQ9H0X4 552 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 MYOZ1Q9NP98 299 aaPredicted RBP20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 EHFQ9NZC4 300 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 MYO18BQ8IUG5 2567 aa20.56■□□□□ 0.88
ECHDC3-201ENST00000379215 TMEM82A0PJX8 343 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 DHFRP00374 187 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 CTXN2P0C2S0 81 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 TSPAN5P62079 268 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 ATPAF1Q5TC12 328 aaPredicted RBP20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 GLCCI1Q86VQ1 547 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 PLPPR1Q8TBJ4 325 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 SLC6A7Q99884 636 aa20.55■□□□□ 0.88
ECHDC3-201ENST00000379215 FUOMA2VDF0 154 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 TRDCB7Z8K6 153 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 MGST3O14880 152 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 NDUFA2O43678 99 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 H2AFB2P0C5Z0 115 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 COX6B1P14854 86 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 SCGB2B2Q4G0G5 96 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 PEG10Q86TG7 708 aaKnown RBP20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 TRAPPC2LQ9UL33 140 aa20.54■□□□□ 0.88
ECHDC3-201ENST00000379215 K7N7A8 449 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 ECI1P42126 302 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 FAM201AQ5SY85 155 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 SHARPINQ9H0F6 387 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 CLEC4MQ9H2X3 399 aaPredicted RBP20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 CACNA1DQ01668 2161 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 ARFGEF3Q5TH69 2177 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 PKDREJQ9NTG1 2253 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 hCG_2014768A0A024R1R8 64 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 IGKV1D-8A0A087WSZ0 117 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 FABP7O15540 132 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 GLP1RP43220 463 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 IL13RA1P78552 427 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 HLA-DRB3P79483 266 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 TRAT1Q6PIZ9 186 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 ZNF788Q6ZQV5 615 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 TGIF2LYQ8IUE0 185 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 DEFB108BQ8NET1 73 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 MED30Q96HR3 178 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 SCGB3A2Q96PL1 93 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 NCOR1P1Q9H4R4 102 aa20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 MBNL3Q9NUK0 354 aaKnown RBP20.53■□□□□ 0.88
ECHDC3-201ENST00000379215 METRNQ9UJH8 293 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms